From: In silico hybridization enables transcriptomic illumination of the nature and evolution of Myxozoa
Assembly | |
---|---|
Raw reads | 409,520,180 |
Reads after quality control | 195,155,200 |
Assembled contigs | 930,419 |
Contigs after redundancy filtration | 575,740 |
Length min-max | 200–16,127 |
Average length | 802 |
N50 | 1288 |
G-C content | 33.30 % |
Raw reads mapped to contigs | 193,101,058 (47.2 %) |
In silico pipeline | |
Only matched to Myxozoa | 232,396 |
Stronger match to Myxozoa | 39,651 |
Total identified as myxozoan | 272,047 (47.3 %) |
Only matched to host | 15,057 |
Stronger match to host | 85,043 |
Match to other contamination | 335 |
Total identified as host/contamination | 100,435 (17.4 %) |
Too close to calla | 14,084 |
No significant match found | 189,174 |
Total without annotation | 203,258 (35.3 %) |