Table 1 Sequencing, assembly, and in silico hybridization statistics
From: In silico hybridization enables transcriptomic illumination of the nature and evolution of Myxozoa
| Assembly | |
|---|---|
| Raw reads | 409,520,180 |
| Reads after quality control | 195,155,200 |
| Assembled contigs | 930,419 |
| Contigs after redundancy filtration | 575,740 |
| Length min-max | 200–16,127 |
| Average length | 802 |
| N50 | 1288 |
| G-C content | 33.30 % |
| Raw reads mapped to contigs | 193,101,058 (47.2 %) |
| In silico pipeline | |
| Only matched to Myxozoa | 232,396 |
| Stronger match to Myxozoa | 39,651 |
| Total identified as myxozoan | 272,047 (47.3 %) |
| Only matched to host | 15,057 |
| Stronger match to host | 85,043 |
| Match to other contamination | 335 |
| Total identified as host/contamination | 100,435 (17.4 %) |
| Too close to calla | 14,084 |
| No significant match found | 189,174 |
| Total without annotation | 203,258 (35.3 %) |