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Table 2 Gene Ontology analysis of genes down-regulated in response to DHA in P. falciparum K1 trophozoites from RNA-seq analysis

From: Plasmodium parasites mount an arrest response to dihydroartemisinin, as revealed by whole transcriptome shotgun sequencing (RNA-seq) and microarray study

Term

Count

List Total

Pop Hits

Pop Total

PValue

FDR

GO:0005829 ~ cytosol

70

276

85

963

3.4E–26

4.2E–23

GO:0044445 ~ cytosolic part

54

276

62

963

4.6E–22

5.8E–19

GO:0006412 ~ translation

99

348

181

1139

3.1E–13

4.5E–10

GO:0005840 ~ ribosome

68

276

117

963

3.1E–12

3.8E–09

GO:0003735 ~ structural constituent of ribosome

62

407

101

1385

1.4E–11

2.0E–08

GO:0022627 ~ cytosolic small ribosomal subunit

22

276

22

963

3.5E–11

4.3E–08

GO:0030529 ~ ribonucleoprotein complex

82

276

159

963

4.5E–11

5.6E–08

GO:0043228 ~ non-membrane-bounded organelle

87

276

186

963

7.1E–09

8.9E–06

GO:0005198 ~ structural molecule activity

65

407

120

1385

6.6E–09

9.3E–06

GO:0015935 ~ small ribosomal subunit

25

276

35

963

6.5E–07

8.1E–04

GO:0000502 ~ proteasome complex

20

276

30

963

5.9E–05

7.4E–02

GO:0044265 ~ cellular macromolecule catabolic process

29

348

55

1139

9.2E–04

1.3E + 00

  1. Enrichment of GO terms in 1137 significantly down-regulated genes (gene list) was calculated relative to the total of 4636 genes detected as expressed in this stage (background list). The GO terms listed are those considered significant from DAVID analysis (FDR < 5 %) and non-redundant by REVIGO filtering