On the relevance of technical variation due to building pools in microarray experiments

BMC Genomics

Table 3 Detection of differential expression by model and data set

Number of transcripts identified as differentially expressed at an FDR of 5 % by data set and model. Simulated data sets s1, s2, and s3 refer to scenarios where none, one third, and all transcripts were associated with a non-zero blending error variance component. The number of transcripts identified with both models is indicated by m1 & m2, transcripts identified solely with the null model (m1) or the full model (m2) are shown in the second-to-last and the last line

ISSN: 1471-2164