Fig. 5

Split genes in the C. albicans mitochondrial genome. a Schematic exon-intron structure and the mapping of RNA sequencing reads in the COX1 gene. b Schematic exon-intron structure and the mapping of RNA sequencing reads in the COB gene. c Schematic exon-intron structure and the mapping of RNA sequencing reads in the RNL gene. Exon coordinates are indicated (the first exon assumed to start with the +1 nucleotide of the transcript, as determined by RNA sequencing mapping and promoter identification), for very short exons the markers were joined for clarity of presentation. Dashed lines in the sequencing mapping represent reads that span the exon-exon junction, reads mapping to the forward (+) strand are shown in green, antisense (− strand) reads are shown in red. In (C) only the reads from the immediate vicinity of the two introns are shown as an inset for clarity. Green boxes represent protein-coding exons, light blue boxes are the rRNA exons. Gene structure and read mapping was visualized in CLC Genomics Suite 8 and edited for clarity