Table 1 Details of the 31 data sets used in the meta-analysis
Code | GEO | Publication | N | P | Pathology |
|---|---|---|---|---|---|
parr | GSE20486 | Parris et al. 2010 [24] | 97 | 18616 | Breast cancer (Diploid) |
crow | GSE15134 | Crowder et al. 2009 [25] | 31 | 16153 | Breast cancer (ER+) |
sirc | GSE17907 | Sircoulomb et al. 2010 [26] | 51 | 14689 | Breast cancer (ERBB2 amplified) |
myll | a | Myllykangas et al. 2008 [27] | 46 | 17050 | Gastric cancer |
junn | a | Junnila et al. 2010 [28] | 10 | 16844 | Gastric cancer |
ch.w | b | Chitale et al. 2009 [29] | 91 | 10285 | Lung adenocarcinoma |
ch.s | b | Chitale et al. 2009 [29] | 94 | 10285 | Lung adenocarcinoma |
hoac | GSE20154 | Goh et al. 2011 [30] | 54 | 14388 | Oesophageal adenocarcinoma |
zho | GSE29023 | Zhou et al. 2012 [31] | 115 | 13697 | Multiple myeloma |
shai | GSE26089 | Shain et al. 2012 [32] | 68 | 14201 | Pancreatic cancer |
vain | GSE28403 | Vainio et al. 2012 [33] | 13 | 10107 | Prostate cancer |
bott | GSE29211 | Bott et al. 2011 [34] | 53 | 10321 | Pleural mesothelioma |
bekh | GSE23720 | Bekhouche et al. 2011 [35] | 173 | 13682 | Breast cancer (Inflammatory) |
chap | GSE26863 | Chapman et al. 2011 [36] | 245 | 13667 | Multiple myeloma |
ooi | GSE22785 | Ooi et al. 2012 [37] | 14 | 10091 | Neuroblastoma |
brag | GSE12668 | Braggio et al. 2009 [38] | 11 | 10310 | Waldenström’s macroglobulinemia |
jons | GSE22133 | Jönsson et al. 2010 [39] | 356 | 4183 | Breast cancer |
mura | GSE24707 | Muranen et al. 2011 [40] | 47 | 4472 | Breast cancer |
lin1 | GSE19915 | Lindgren et al. 2010 [41] | 72 | 4965 | Urothelial carcinoma |
beck | GSE17555 | Beck et al. 2010 [42] | 18 | 12174 | Leiomyosarcoma |
toed | GSE18166 | Toedt et al. 2011 [43] | 74 | 4289 | Astrocytic gliomas |
ell | GSE35191 | Ellis et al. 2012 [44] | 124 | 13569 | Breast cancer |
gra.1 | GSE35988 | Grasso et al. 2012 [45] | 85 | 12849 | Prostate cancer |
gra.2 | GSE35988 | Grasso et al. 2012 [45] | 34 | 12813 | Prostate cancer |
lenz | GSE11318 | Lenz et al. 2009 [46] | 203 | 15212 | Lymphoma |
lin2 | GSE32549 | Lindgren et al. 2012 [47] | 131 | 8450 | Urothelial carcinoma |
micc | GSE38230 | Micci et al. 2013 [48] | 12 | 16657 | Vulva squamous cell carcinoma |
tayl | GSE21032 | Taylor et al. 2010 [49] | 155 | 14572 | Prostate cancer |
coco | GSE25711 c | Coco et al. 2012 [50] | 36 | 4394 | Neuroblastoma |
med | GSE14079 | Medina et al. 2009 [51] | 8 | 6376 | Lung cancer |
przy | GSE54188 | Przybyl et al. 2014 [52] | 53 | 17032 | Synovial sarcoma |