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Fig. 7 | BMC Genomics

Fig. 7

From: Transcriptome-wide functional characterization reveals novel relationships among differentially expressed transcripts in developing soybean embryos

Fig. 7

Isoform-specific co-expression network for the set of 2,938 transcripts. ArrayMining was used to construct the co-expression network. The resulting network was visualized in Cytoscape. Transcripts (nodes) are color-coded based on their respective super-cluster. a Co-expression network visualization of the 2,938 transcripts in the organic layout. b Co-expression sub-network for all 318 ABA-related and FUS3-regulated targets (see Results AS events related to ABA and/or FUS3 action section) grouped by super-cluster. The relative density of edges (in gray) reflects different degrees of connectivity among super-clusters. The majority of ABA- and FUS3-related transcripts (310) were located in the three major super-clusters

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