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Table 2 Summary statistics of four CNV detection filtering models

From: Genomic population structure and prevalence of copy number variations in South African Nguni cattle

MDL GCWF DLRS GCMDL ANMLs QCPS ANMLsCNVs CNVRs AvL
1 0.040 0.300 Yes 492 379 281 353 259283.62
2 0.040 0.300 No 492 326 231 334 270939.14
3 0.070 0.318 Yes 492 453 361 501 237869.23
4 0.070 0.318 No 492 462 352 486 240572.18
  1. The stringencys (GCWF and DLRS), the number of animals (ANMLs), the number of animals that passed (QCPS), the number of animals with CNVs present in their genome (ANMLsCNVs), the number of CNVRs and the average length (AvL) of the CNVs identified within Nguni cattle