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Table 3 The 35 most expressed transcripts in S. pomifera leaf trichomes, along with their length, expression in trichomes (in FPKM values), top BLAST NR hit, % identity with the top hit and its GO annotation

From: Combined metabolome and transcriptome profiling provides new insights into diterpene biosynthesis in S. pomifera glandular trichomes

S. pomifera transcript Length FPKM Top BLAST NR hit % identity GO annotation
Unigene34508 248 30,475.2 Hypothetical protein NitaMp027 [TOBAC] 99 GO:0005739
Unigene5960 726 11,636.4 No hit   
CL3171.Contig2 980 10,338.5 Predicted: ribulose bisphosphate carboxylase small chain, chloroplastic-like [EUCGR] 75 GO:0019253
CL2955.Contig2 677 8953.6 No hit   
CL8497.Contig1 706 7747.5 Lipid transfer protein [SESIN] 81 GO:0008289
Unigene34505 997 6766.4 Predicted: uncharacterized protein LOC105170030 [SESIN] 66 GO:0044464
CL9261.Contig1 1266 6323.3 Predicted: GDSL esterase/lipase At5g33370-like [SESIN] 78 GO:0006629
Unigene33614 1136 5655.3 SMLII [SALMI] 72  
CL3502.Contig4 560 5539.9 Lipid transfer protein 2 [SALMI] 93 GO:0006810
Unigene10249 266 5028.6 Lipid transfer protein 1 [SALMI] 85  
Unigene34506 679 4980.5 No hit   
CL2203.Contig2 913 4616.1 Pathogenesis-related protein 10 [SALMI] 85 GO:0009607
CL3171.Contig3 831 4219.9 Predicted: ribulose bisphosphate carboxylase small chain, chloroplastic-like [EUCGR] 75 GO:0019253
CL7758.Contig2 672 4140.8 Chlorophyll a/b-binding protein, partial [Schiedea haleakalensis] 97 GO:0046872
CL4643.Contig2 332 4047.4 Predicted: photosystem II 10 kDa polypeptide, chloroplastic [SESIN] 85 GO:0015979
CL1963.Contig2 569 3695.1 No hit   
Unigene19442 829 3596.8 Putative metallothionin 2a [SALMI] 95 GO:0046872
Unigene5947 858 3446.2 Histone H3.3 [ARATH] 100 GO:0000786
Unigene31727 274 3056.0 BnaC06g21170D [BRANA] 91 GO:0016023
CL5332.Contig1 791 2943.3 No hit   
CL1258.Contig1 1538 2773.7 Chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase activase [PLESU] 87 GO:0005524
CL495.Contig1 2029 2742.6 Predicted: uncharacterized protein LOC104647985 [SOLLC] 54  
CL1454.Contig2 1262 2666.7 Predicted: dehydration-responsive protein RD22 [SESIN] 62  
CL2498.Contig2 763 2658.0 Predicted: probable thionin-2.4 [CAMSA] 68 GO:0006952
Unigene22580 532 2506.2 Predicted: chlorophyll a-b binding protein, chloroplastic [NICTO] 93 GO:0046872
Unigene29603 788 2494.0 Non-specific lipid-transfer protein 3 [ARATH] 50 GO:0009737
Unigene34507 653 2393.6 Predicted: photosystem I reaction center subunit VI, chloroplastic-like [SESIN] 93 GO:0010287
CL2671.Contig2 511 2357.7 Predicted: probable protein Pop3 [SESIN] 49  
Unigene32013 334 2357.0 Chloroplast photosystem II 10 kDa protein, partial [ARAHY] 94 GO:0015979
Unigene10346 336 2309.4 1-hydroxy-2-methyl-butenyl 4-diphosphate reductase [CATRO] 43  
CL182.Contig3 3830 2269.2 Sabinene synthase, partial [S. pomifera] 100 GO:0005525
CL9337.Contig1 2282 2183.6 Cinnamoyl CoA reductase [SALMI] 93 GO:0009809
Unigene10272 1075 2181.4 Predicted: photosystem I reaction center subunit XI, chloroplastic [SESIN] 93 GO:0010287
Unigene34510 622 2160.2 Phytosulfokine precursor [AVIMR] 62 GO:0007275
Unigene32188 693 2132.8 Predicted: chlorophyll a-b binding protein 1D-like [NELNU] 96 GO:0046872
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