Table 9 Top 20 of downpregulated contigs in the acaricide resistant P. ulmi PSR-TK strain relative to the susceptible HS strain. See Additional file 17 for a full list of differentially expressed contigs
Contig IDa | log2FC | Blast2GO description | T. urticae BLASTx-hit (E-value)b | T. urticae gene name |
|---|---|---|---|---|
Contig_10595 | −6,31 | nucleolin 2-like | tetur04g03300 (9,00E−17) | 4Fe-4S ferredoxin, iron-sulpur binding domain |
Contig_03877 | −6,05 | krab-a domain-containing protein | tetur03g07110 (7,00E−05) | zinc finger protein |
Contig_04800 | −5,66 | chemosensory gustatory receptor family | tetur07g05030 (5,00E−25) | gustatory receptor family |
Contig_06558 | −5,29 | DNA polymerase | tetur21g01960 (6,00E−09) | pacifastin |
Contig_02213 | −4,80 | histone-lysine n-methyltransferase setmar-like | tetur04g09537 (8,00E−06) | transposable element Tc3-related transposase |
Contig_04690 | −4,55 | polyprotein | - | - |
Contig_09905 | −4,39 | collagen alpha-4 chain | tetur38g00240 (9,00E−24) | collagen alpha-2 |
Contig_03088 | −4,10 | farnesoic acid o methyltransferase-like protein | tetur30g00780 (1,00E−14) | farnesoic acid O-methyltransferase-like protein |
Contig_02422 | −4,04 | reverse transcriptase maturase | tetur21g01960 (3,00E−11) | proteinase inhibitor I19, pacifastin |
Contig_00445 | −3,99 | esterase type b | tetur20g03250 (0) | Carboxylcholinesterases (TuCCE50) |
Contig_02182 | −3,97 | retrovirus-related pol polyprotein from transposon partial | tetur09g03700 (1,00E−18) | hypothetical cell surface protein |
Contig_08551 | −3,92 | adenylyl cyclase-associated protein | tetur14g00690 (1,00E−29) | adenylate cyclase-associated CAP |
Contig_08025 | −3,76 | Acetyl - partial | tetur21g02170 (1,00E−29) | ACCase |
Contig_10729 | −3,73 | hypothetical protein TcasGA2_TC016169 | tetur04g02090 (3,00E−17) | similar to gag-like protein |
Contig_09937 | −3,41 | expressed sequence ai451617 | tetur03g07110 (3,00E−12) | zinc finger protein |
Contig_04137 | −3,40 | alpha-galactosidase a | tetur02g04310 (1,00E−42) | glycoside hydrolase, catalytic core |
Contig_08881 | −3,21 | reverse transcriptase | tetur63g00020 (6,00E−18) | hypothetical protein |
Contig_00197 | −3,16 | structural polyprotein | - | - |
Contig_11839 | −3,07 | paired box and transposase domain | tetur04g09537 (2,00E−13) | transposable element Tc3-related transposase |
Contig_00506 | −3,04 | retrovirus-related pol | tetur40g00380 (4,00E−14) | hypothetical protein |