Table 3 Enrichment tests for gene ontology categories found within recombination hotspots
From: Genome-wide analysis of Fusarium graminearum field populations reveals hotspots of recombination
GO-ID | Molecular function | Category | P-value | Genes within hotspotsa | Genes outside hotspotsb | Enrichment |
|---|---|---|---|---|---|---|
GO:0005773 | Vacuole | C | 6.92E-04 | 10 | 177 | OVER |
GO:0009423 | Chorismate biosynthetic process | P | 1.44E-03 | 2 | 2 | OVER |
GO:0016020 | Membrane transport | C | 1.57E-03 | 44 | 1804 | OVER |
GO:0005215 | Transporter activity | F | 1.57E-03 | 20 | 602 | OVER |
GO:0005507 | Copper ion binding | F | 2.57E-03 | 4 | 33 | OVER |
GO:0043231 | Intracellular membrane-bounded organelle | C | 3.11E-03 | 69 | 3322 | OVER |
GO:0016049 | Cell growth | P | 3.12E-03 | 4 | 35 | OVER |
GO:0043227 | Membrane-bounded organelle | C | 3.17E-03 | 69 | 3324 | OVER |
GO:0005774 | Vacuolar membrane | C | 3.44E-03 | 7 | 118 | OVER |
GO:0000324 | Fungal-type vacuole | C | 3.48E-03 | 8 | 151 | OVER |
GO:0000323 | Lytic vacuole | C | 3.48E-03 | 8 | 151 | OVER |
GO:0000322 | Storage vacuole | C | 3.48E-03 | 8 | 151 | OVER |
GO:0072423 | Response to DNA damage checkpoint signaling | P | 3.52E-03 | 2 | 4 | OVER |
GO:0072402 | Response to DNA integrity checkpoint signaling | P | 3.52E-03 | 2 | 4 | OVER |
GO:0046417 | Chorismate metabolic process | P | 3.52E-03 | 2 | 4 | OVER |
GO:0006378 | mRNA polyadenylation | P | 3.55E-03 | 3 | 17 | OVER |
GO:0031224 | Intrinsic component of membrane | C | 3.72E-03 | 31 | 1189 | OVER |
GO:0044765 | Single-organism transport | P | 3.79E-03 | 33 | 1294 | OVER |
GO:0006810 | Transport activity | P | 3.98E-03 | 36 | 1456 | OVER |
GO:0016776 | Phosphotransferase activity, phosphate group as acceptor | F | 4.09E-03 | 3 | 18 | OVER |
GO:0009987 | Cellular process | P | 4.11E-03 | 92 | 4827 | OVER |
GO:0044437 | Vacuolar part | C | 4.27E-03 | 7 | 123 | OVER |
GO:0022804 | Active transmembrane transporter activity | F | 4.35E-03 | 8 | 157 | OVER |
GO:1902578 | Single-organism localization | P | 4.45E-03 | 34 | 1360 | OVER |
GO:0031501 | Mannosyltransferase complex | C | 4.88E-03 | 2 | 5 | OVER |
GO:0051234 | Establishment of localization | P | 5.26E-03 | 36 | 1481 | OVER |
GO:0043631 | RNA polyadenylation | P | 5.32E-03 | 3 | 20 | OVER |
GO:0040007 | Growth | P | 5.99E-03 | 5 | 69 | OVER |
GO:1902626 | Assembly of large subunit precursor of preribosome | P | 6.44E-03 | 2 | 6 | OVER |