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Table 2 The percentages of transcripts that exist in various developmental stages of Kmar fish

From: Transcriptomics of diapause in an isogenic self-fertilizing vertebrate

Comparison Transcripts detected in WGSb (n = 67,374) RNA-Seqc (n = 206,747) RNA-Seqd (n = 97,979)
Diapause vs. pre-Diapause Diapause only 1.92 + 0.38 % 1.11 + 0.04 % 0.23 + 0.00 %
  pre-Diapause only 0.86 + 0.40 % 0.62 + 0.15 % 0.16 + 0.04 %
  both Diapause & pre-Diapause 96.94 + 0.16 % 98.01 + 0.14 % 99.59 + 0.04 %
  othera 0.28 + 0.14 % 0.50 + 0.15 % 0.02 + 0.00 %
Diapause vs. post-Diapause Diapause only 1.05 + 0.48 % 1.21 + 0.09 % 0.36 + 0.00 %
  post-Diapause only 1.03 + 0.49 % 1.01 + 0.22 % 0.17 + 0.04 %
  both Diapause & post-Diapause 97.81 + 1.02 % 97.68 + 0.18 % 99.45 + 0.04 %
  othera 0.11 + 0.06 % 0.09 + 0.02 % 0.01 + 0.00 %
  1. atranscripts exist in other developmental stage, i.e. in post-diapause for diapause vs. pre-diapause, and vice versa: in pre-diapause for diapause vs. post-diapause;
  2. bassembly was built by ABySS;
  3. ctranscriptome was assembled by Trans-ABySS;
  4. dtranscriptome was assembled by Trinity