Table 5 SNPs identified by strategy B using BHIT in soybean data
Index | Interaction SNPs | Mapped gene | Gene annotation |
|---|---|---|---|
1 | Gm05_34107233_A_G | Glyma05g28240 | Enzyme:EC 3.6.4.4 Plus-end-directed kinesin ATPase |
Gm05_40523205_A_G | Glyma05g36730 | Homologous gene OPI10 in Medicago Truncatula: involved in phospholipid biosynthesis | |
2 | Gm13_28866067_A_G | Glyma13g25650 | Subtilase family protein, acted in serine-type peptidase activity |
Gm13_28868130_A_C | |||
Gm13_29473740_T_C | Glyma13g26260 | Enzyme EC 5.2.1.8 Peptidylprolyl isomerase | |
3 | Gm10_47616648_C_T | Glyma10g40110 | Pyruvate kinase, participate in fatty acid biosynthetic process |
Gm10_47618284_C_T | |||
Gm10_47730445_G_A | Glyma10g40260 | Has homologous Gene Fatty acyl-CoA reductase 3 in Medicago Truncatula | |
Gm10_47753689_G_A | Glyma10g40290 | Glycosyl hydrolase superfamily protein | |
4 | Gm05_8688492_T_C | Glyma05g08810 | EC 4.99.1.4 Sirohydrochlorin ferrochelatase |
Gm05_8714882_G_A | Glyma05g08830 | Pre-mRNA cleavage complex II protein family | |
Gm05_8715355_C_T | |||
Gm05_8800108_C_T | |||
Gm05_8800879_C_T | |||
Gm05_8817375_T_C | Glyma05g08970 | Unknown | |
Gm05_8904128_A_G | Glyma05g09080 | EC 1.14.15.3 Alkane 1-monooxygenase |