Table 3 Summary of homology searches of contigs against TAIR10 gene dataset using BLAST
| Â | Raw Contigs | Longest Contigs | Clustered Contigs | Annotated Contigs | Plant DB Contigs | PlantClust50 DB Contigs |
|---|---|---|---|---|---|---|
Hit contigs | 58,376 (93.64)* | 54,175 (93.39) | 55,857 (94.03) | 23,873 (100) | 40,179 (94.61) | 24,784 (92.59) |
Unique hit contigs | 10,119 (16.23) | 10,676 (18.40) | 10,571 (17.79) | 23,873 (100) | 11,382 (26.80) | 12,398 (46.32) |
Multiple hit contigs | 48,257 (77.41) | 43,499 (74.99) | 45,286 (76.23) | 0 (0) | 28,796 (67.81) | 12,386 (46.28) |
No hit | 3963 (6.36) | 3832 (6.61) | 3548 (5.97) | 0 (0) | 2289 (0.05) | 1982 (0.07) |
Total | 62,339 (100) | 58,007 (100) | 59,405 (100) | 23,873 (100) | 42,467 (100) | 26,766 (100) |