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Table 1 Genomic distribution of different trinucleotide repeats in H. irregulare and other fungi. Total length (bp per megabase of DNA) of fully standardized trinucleotide repeats in different genomic regions of the H. irregulare genome and of other fungal genomes was shown

From: Selection processes in simple sequence repeats suggest a correlation with their genomic location: insights from a fungal model system

Motif

H. irregulare

Fungia

 

All

Interb

Introns

Exons

5’UTR

3’UTR

All

Interb

Introns

Exons

AAC

26

17

10

26

63

263

108

104

145

107

AAG

20

27

5

16

72

57

59

84

34

55

AAT

11

26

5

-

-

-

119

162

537

34

ACC

53

42

17

63

299

148

36

60

14

26

ACG

128

88

79

174

198

218

12

6

–

12

ACT

17

16

53

5

105

33

15

30

–

5

AGC

108

82

52

144

152

175

55

19

103

67

AGG

65

50

31

88

67

108

31

34

45

27

ATC

14

26

-

4

190

-

32

43

53

22

CCG

125

73

105

170

274

222

18

8

20

26

  1. a data from [24]
  2. b Intergenic region