Bacterial small RNAs in the Genus Rickettsia

BMC Genomics

Table 3 sRNA target predictions

sRNA prediction	Number of targets predicted by
sRNA prediction	TargetRNA	CopraRNA
1*	39	47
2	3	43
3	4	40
4	11	23
5*	27	50
6	21	49
7	0	53
8	8	37
9*	19	43
10*	32	49
11	17	49
12	11	44
13	17	49
14	13	37
15	25	50
16	12	45
17	18	51
18	2	54
19	9	45
20	10	39
21	12	39
22	14	46
23	10	45
24*	24	54
25*	29	36
27	6	37
Total	393	1154

Number of target predictions per each sRNA for R. prowazekii strain Breinl. Candidate #26 is not listed, as SIPHT provided no #26 prediction. Asterisks represent those candidates selected for confirmation of expression

ISSN: 1471-2164