Table 2 The best predictive performance of the different methods
Method | #SNP | ASW | CEU | CHB/CHD/JPT | GIH | LWK | MEX | MKK | TSI | YRI | Total |
|---|---|---|---|---|---|---|---|---|---|---|---|
SMO | 2192 | 0.932 | 0.921 | 1.000 | 1.000 | 0.926 | 0.945 | 0.987 | 0.724 | 0.994 | 0.955 |
IB1 | 2413 | 0.757 | 0.943 | 1.000 | 0.930 | 0.213 | 0.863 | 0.795 | 0.483 | 1.000 | 0.838 |
Dagging | 186 | 0.338 | 0.964 | 1.000 | 0.988 | 0.383 | 0.808 | 0.968 | 0.345 | 0.994 | 0.840 |
RandomForest | 75 | 0.459 | 0.900 | 0.993 | 0.884 | 0.543 | 0.74 | 0.853 | 0.345 | 0.931 | 0.815 |