Table 2 Differentially expressed transcripts cited in the Results and Discussion

#1

TC215712_723_40_S

R2R3-myb transcription factor, putative

0.001

2.20

0.001

2.14

0.035

2.02

#2

TC194872_1016_38_S

Amino acid transporter, putative

0.035

-1.74

#3

TC191891_2590_35_S

Plasma membrane H⁺-ATPase

0.003

−1.72

0.010

−1.41

#4

TC202455_704_34_X2

Fructokinase-2

0.006

−1.39

0.008

−1.47

#5

TC215677_337_34_X2

Fructose-bisphosphate aldolase

0.008

−1.40

0.016

−1.29

#6

TC203759_474_40_S

Succinate dehydrogenase

0.001

−1.67

0.003

−1.40

#7

TC205577_582_35_S

2-Oxoglutarate dehydrogenase, putative

0.002

−1.06

0.002

−1.08

#8

TC200117_1178_35_S

Methionine synthase

0.004

−1.94

0.009

−1.72

#9

TC211903_86_41_S

SAM-dependent methyltransferase

0.003

−1.40

0.013

−1.09

#10

TC212657_260_40_S

SAM-dependent methyltransferase

0.011

−1.10

0.020

−1.06

#11

TC201480_474_36_S

Phenylalanine ammonia-lyase

0.016

−1.12

0.018

−1.21

#12

TC207536_637_35_S

ABC transporter family protein

0.002

−1.32

0.003

−1.23

#13

TC192092_3871_40_S

Cellulose synthase

0.002

−1.34

0.001

−1.60

#14

TC192418_1233_40_S

Cellulose synthase catalytic subunit

0.002

−1.72

0.003

−1.54

#15

TC214973_590_40_S

Cellulose synthase A catalytic subunit 3

0.004

−1.11

0.004

−1.23

#16

TC204385_218_36_X2

UDP-apiose/xylose synthase

0.003

−1.69

0.026

−1.11

#17

TC192860_1143_39_S

Expansin 1 protein

0.017

1.28

0.026

1.26

#18

TC198812_683_37_S

Glucan endo-1,3-beta-glucosidase, putative

0.017

1.05

0.010

1.31

#19

TC201525_569_35_S

Rho GTPase-activating protein At5g61530

0.002

−1.43

0.003

−1.34

#20

TC196357_464_36_S

ATP/GTP/Ca⁺⁺ binding protein

0.006

−1.60

0.022

−1.29

#21

TC211495_432_40_S

CBL-interacting protein kinase 1

0.004

−1.18

0.003

−1.45

#22

TC212764_568_34_X2

Protein IQ-DOMAIN 14

0.003

−1.35

0.008

−1.20

#23

TC197849_292_41_X2

Ras-related GTP binding protein

0.016

−1.01

0.017

−1.10

#24

TC207137_449_35_S

RAS superfamily GTP-binding protein-like

0.002

−1.38

0.007

−1.07

#25

TC196878_2001_40_S

Malic enzyme

0.010

−1.20

0.013

−1.25

#26

TC191720_1243_40_S

NADH:ubiquinone oxidoreductase-like

0.012

1.29

0.027

1.17

#27

TC210154_386_41_X4

Glutamate dehydrogenase

0.005

−1.45

0.016

−1.23

#28

TC192029_938_40_S

Putative basic helix-loop-helix protein bHLH7

0.005

1.17

0.007

1.23

#29

TC208592_1291_35_S

Triosephosphate isomerase, chloroplastic (TIM)

0.004

−1.27

#30

TC194624_64_34_S

6-Phosphogluconate dehydrogenase

0.002

−1.20

#31

TC199057_182_40_S

Putative pyruvate dehydrogenase E1 beta subunit

0.036

−1.15

#32

TC201985_646_40_S

Citrate synthase

0.001

−1.39

#33

TC212309_491_35_S

Phosphoenolpyruvate carboxylase

0.048

−1.03

#34

TC193693_30_35_S

NADH dehydrogenase, putative

0.003

−1.21

#35

TC195215_205_34_X2

NADH dehydrogenase, putative

0.003

−1.41

#36

TC193283_737_36_S

PHB2

0.001

−1.19

#37

TC212977_600_37_S

Nitrite reductase

0.049

1.12

#38

TC196100_60_35_S

Plastid glutamine synthetase GS2

0.004

−1.17

#39

TC211800_873_40_S

Putative ferredoxin-dependent glutamate synthase 1

0.006

−1.00

#40

TC197827_1154_40_S

Leucine-rich repeat/extensin

0.030

−1.13

#41

TC203111_299_41_X2

Extensin-like protein

0.001

−1.34

#42

TC204863_245_40_S

Extensin-like protein Ext1

0.016

−1.15

#43

TC216971_395_35_S

Extensin class 1 protein

0.030

1.10

#44

TC196973_752_38_X2

Pectinesterase

0.019

1.11

#45

TC210207_490_35_S

Pectinesterase

0.004

−1.18

#46

TC193792_675_36_S

Putative glutathione S-transferase T5

0.023

1.48

#47

TC202880_782_35_S

Glutathione S-transferase

0.003

−1.05

#48

TC207401_351_40_S

Glutathione S-transferase/peroxidase

0.029

1.17

#49

TC211832_300_41_X2

Glutathione-regulated potassium-efflux system protein kefB, putative

0.034

1.09

#50

TC197773_1109_35_S

Peroxidase

0.032

1.08

#51

TC209710_467_35_S

Peroxidase 16, putative

0.012

−1.17

#52

TC192043_591_40_X3

17.6 kDa class I heat shock protein (Hsp20.0)

0.044

1.03

#53

TC194246_668_40_S

Heat shock protein 70 (HSP70)

0.002

−1.00

#54

TC197122_92_35_S

Hsp90 co-chaperone AHA1, putative

0.002

−1.24

#55

TC207719_568_36_S

Chaperone protein DNAj, putative

0.036

1.06

#56

TC208736_54_40_S

Chaperonin-60 alpha subunit

0.044

1.05

#57

TC214617_585_34_X2

Hsp70-interacting protein 1

0.002

−1.17

#58

TC195735_752_37_S

Avr9/Cf-9 rapidly elicited protein

0.045

1.98

#59

TC196669_798_35_S

Avr9/Cf-9 rapidly elicited protein 1

0.040

2.57

#60

TC198633_775_40_S

Avr9/Cf-9 rapidly elicited protein 231

0.019

1.94

#61

TC200277_609_40_S

Avr9/Cf-9 rapidly elicited protein 194

0.032

1.81

#62

TC203605_414_40_S

Avr9/Cf-9 rapidly elicited protein 75

0.037

1.59

#63

TC204489_664_34_X2

Avr9/Cf-9 rapidly elicited protein 20

0.008

2.15

#64

TC207986_456_38_S

Avr9/Cf-9 rapidly elicited protein 231

0.006

3.69

#65

TC208735_320_38_S

Avr9/Cf-9 rapidly elicited protein 65

0.006

3.28

#66

TC200524_503_40_S

WRKY-type DNA binding protein

0.035

1.48

#67

TC201566_1542_35_S

WRKY-like transcription factor

0.040

1.68

#68

TC205993_1465_40_S

WRKY transcription factor 1

0.023

2.50

#69

TC209196_761_40_S

Double WRKY type transfactor

0.014

1.87

#70

TC214887_802_40_S

WRKY transcription factor-30

0.006

1.20

#71

TC191592_2431_37_S

GRAS6

0.006

1.09

#72

TC192009_1993_40_S

GRAS1

0.038

1.14

#73

TC192616_2450_39_S

GRAS family transcription factor

0.018

1.37

#74

TC193990_2097_35_S

GRAS9

0.029

1.20

#75

TC195584_1695_40_S

GRAS4

0.023

1.28

#76

TC208078_576_35_S

GRAS4

0.007

2.01

#77

TC213462_831_40_S

GRAS2 transcription factor

0.034

1.93

#78

TC197535_663_40_S

3-Hydroxyacyl-CoA dehyrogenase

0.004

−1.21

#79

TC203351_729_35_S

Fatty acid desaturase, putative

0.004

−1.08

#80

TC201677_436_40_S

Acyl-CoA synthetase

0.002

−1.33

#81

TC195028_1952_40_S

Putative phospholipase C

0.026

−1.12

#82

TC196917_1568_38_S

Delta(14)-sterol reductase

0.026

1.02

#83

TC215747_470_40_S

Phosphatidic acid phosphatase

0.041

−1.00

#84

TC195925_676_35_X2

Ascorbate oxidase

0.049

−1.03

#85

TC211305_518_35_S

Oligopeptide transporter, putative

0.044

−1.06

#86

TC196465_645_40_X2

Gibberellin 20 oxidase, putative

0.029

−1.03

#87

TC204594_438_40_S

TGA10 transcription factor

0.014

−1.26

#88

TC196692_694_37_X2

GRAS1

0.041

−1.18

#89

TC211460_599_40_S

bHLH transcription factor JAF13

0.014

−1.01

#90

TC214149_2_40_S

Myb-like protein

0.029

1.07

#91

TC204269_546_39_S

Homeobox-leucine zipper protein ATHB-52

0.007

1.12