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Table 4 Potential genetic markers for MLST in P. aeruginosa strains

From: Pangenome-wide and molecular evolution analyses of the Pseudomonas aeruginosa species

Gene familya

Functionb

Omega (ω)

Length (bp)

Strain frequencyc

3333

Chitin binding protein

108

1170

98.9 % (179)

3675

Flagellar basal-body rod protein FlgF

5884

750

99.5 % (180)

4766

Predicted branched-chain amino acid permease AzIC

86

763

96.7 % (175)

5348

Unknown function

32

573

99.5 % (180)

  1. aNomenclature according to pangenome gene inventory
  2. bFunction inferred from KEGG, SMART, and/or BLAST-based search
  3. cNumber of strains carrying respective genes are denoted in parenthesis