From: De novo transcriptome analyses of host-fungal interactions in oil palm (Elaeis guineensis Jacq.)
GO terms that are enriched in DEGs of G-treated oil palm roots compared to untreated oil palm roots | |||
---|---|---|---|
Biological process | |||
Up-regulated genes | |||
In G-treatment only | Â | Â | |
GO:0030636 | acetate derivative biosynthetic process | GO:0046483 | heterocycle metabolic process |
GO:0030635 | acetate derivative metabolic process | GO:0006972 | hyperosmotic response |
GO:0006083 | acetate metabolic process | GO:0006811 | ion transport |
GO:0006026 | aminoglycan catabolic process | GO:0006629 | lipid metabolic process |
GO:0006022 | aminoglycan metabolic process | GO:0051179 | localization |
GO:0019438 | aromatic compound biosynthetic process | GO:0007263 | nitric oxide mediated signal transduction |
GO:0015976 | carbon utilization | GO:0071704 | organic substance metabolic process |
GO:0016052 | carbohydrate catabolic process | GO:0015846 | polyamine transport |
GO:0005975 | carbohydrate metabolic process | GO:0009152 | purine ribonucleotide biosynthetic process |
GO:0015977 | carbon fixation | GO:0032268 | regulation of cellular protein metabolic process |
GO:0071281 | cellular response to iron ion | GO:0010035 | response to inorganic substance |
GO:0071446 | cellular response to salicylic acid stimulus | GO:0010039 | response to iron ion |
GO:0009805 | coumarin biosynthetic process | GO:0019748 | secondary metabolic process |
GO:0006952 | defense response | GO:0001736 | establishment of planar polarity |
GO:0006097 | glyoxylate cycle | GO:0006099 | tricarboxylic acid cycle |
In both G- and T-treatments | Â | Â | |
GO:0043450 | alkene biosynthetic process | GO:0009056 | catabolic process |
GO:0009058 | biosynthetic process | GO:0006091 | generation of precursor metabolites and energy |
GO:0055114 | oxidation-reduction process | GO:0010817 | regulation of hormone levels |
GO:0080167 | response to karrikin | GO:0051246 | regulation of protein metabolic process |
GO:0044283 | small molecule biosynthetic process | GO:0006414 | translational elongation |
In T-treatment only | Â | Â | |
GO:0015837 | amine transport | GO:0044242 | cellular lipid catabolic process |
GO:0046942 | carboxylic acid transport | GO:0006732 | coenzyme metabolic process |
GO:0044249 | cellular biosynthetic process | GO:0006006 | glucose metabolic process |
GO:0034754 | cellular hormone metabolic process | GO:0071705 | nitrogen compound transport |
Down-regulated genes | |||
In G-treatment only | Â | Â | |
GO:0071103 | DNA conformation change | GO:0015979 | photosynthesis |
GO:0022900 | electron transport chain | GO:0006412 | translation |
In both G- and T-treatments | Â | Â | |
GO:0006091 | generation of precursor metabolites and energy | GO:0015992 | proton transport |
GO:0006818 | hydrogen transport | GO:0042254 | ribosome biogenesis |
In T-treatment only | Â | Â | |
GO:0006119 | oxidative phosphorylation | GO:0010200 | response to chitin |
Cellular compartment | Â | Â | |
Up-regulated genes | |||
In G-treatment only | Â | Â | |
GO:0009341 | beta-galactosidase complex | GO:0005887 | integral to plasma membrane |
GO:0071944 | cell periphery | GO:0016020 | membrane |
GO:0005618 | cell wall | GO:0030117 | membrane coat |
GO:0048475 | coated membrane | GO:0044425 | membrane part |
GO:0030312 | external encapsulating structure | GO:0005773 | vacuole |
GO:0030660 | Golgi-associated vesicle membrane | Â | Â |
In both G- and T-treatments | Â | Â | |
GO:0009325 | nitrate reductase complex | Â | Â |
Down-regulated genes | |||
In G-treatment only | Â | Â | |
GO:0044429 | mitochondrial part | GO:0032993 | protein-DNA complex |
GO:0043228 | non-membrane-bounded organelle | GO:0045259 | proton-transporting ATP synthase complex |
GO:0000786 | nucleosome | GO:0016469 | proton-transporting two-sector ATPase complex |
GO:0031984 | organelle subcompartment | GO:0009579 | thylakoid |
GO:0034357 | photosynthetic membrane | GO:0042716 | plasma membrane-derived chromatophore |
GO:0030077 | plasma membrane light-harvesting complex | Â | Â |
In both G- and T-treatments | Â | Â | |
GO:0030529 | ribonucleoprotein complex | GO:0005840 | ribosome |
Molecular function | |||
Up-regulated genes | |||
In G-treatment only | Â | Â | |
GO:0009815 | 1-aminocyclopropane-1-carboxylate oxidase activity | GO:0016829 | lyase activity |
GO:0004013 | adenosylhomocysteinase activity | GO:0003796 | lysozyme activity |
GO:0030246 | carbohydrate binding | GO:0000287 | magnesium ion binding |
GO:0003824 | catalytic activity | GO:0046872 | metal ion binding |
GO:0016206 | catechol O-methyltransferase activity | GO:0016210 | naringenin-chalcone synthase activity |
GO:0043169 | cation binding | GO:0016491 | oxidoreductase activity |
GO:0016405 | CoA-ligase activity | GO:0016903 | oxidoreductase activity, acting on the aldehyde or oxo group of donors |
GO:0016798 | hydrolase activity, acting on glycosyl bonds | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor |
GO:0005222 | intracellular cAMP activated cation channel activity | GO:0030414 | peptidase inhibitor activity |
GO:0043167 | ion binding | GO:0004665 | prephenate dehydrogenase (NADP+) activity |
GO:0005506 | iron ion binding | GO:0022857 | transmembrane transporter activity |
GO:0052633 | isocitrate hydro-lyase (cis-aconitate-forming) activity | GO:0005215 | transporter activity |
GO:0016874 | ligase activity | GO:0016877 | ligase activity, forming carbon-sulfur bonds |
In both G- and T-treatments | Â | Â | |
GO:0005275 | amine transmembrane transporter activity | GO:0009703 | nitrate reductase (NADH) activity |
GO:0003680 | AT DNA binding | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
GO:0004108 | citrate (Si)-synthase activity | GO:0050242 | pyruvate, phosphate dikinase activity |
In T-treatment only | Â | Â | |
GO:0004022 | alcohol dehydrogenase (NAD) activity | GO:0005342 | organic acid transmembrane transporter activity |
GO:0015174 | basic amino acid transmembrane transporter activity | GO:0008756 | o-succinylbenzoate-CoA ligase activity |
GO:0020037 | heme binding | GO:0016661 | oxidoreductase activity, acting on other nitrogenous compounds as donors |
GO:0009678 | hydrogen-translocating pyrophosphatase activity | GO:0030598 | rRNA N-glycosylase activity |
GO:0004427 | inorganic diphosphatase activity | GO:0046906 | tetrapyrrole binding |
Down-regulated genes | |||
In G-treatment only | Â | Â | |
GO:0004767 | sphingomyelin phosphodiesterase activity | GO:0016762 | xyloglucan:xyloglucosyl transferase activity |
In both G- and T-treatments | Â | Â | |
GO:0045158 | electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity | GO:0003735 | structural constituent of ribosome |
GO:0045156 | electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | GO:0005198 | structural molecule activity |
In T-treatment only | Â | Â | |
GO:0043168 | anion binding | GO:0003954 | NADH dehydrogenase activity |
GO:0004427 | inorganic diphosphatase activity | GO:0016651 | oxidoreductase activity, acting on NADH or NADPH |
GO:0005506 | iron ion binding | Â | Â |