Skip to main content

Table 5 List of the most significant associations with RSM/IS (P-value < 5.0E-07) in the AGRE cohort

From: Evidence for contribution of common genetic variants within chromosome 8p21.2-8p21.1 to restricted and repetitive behaviors in autism spectrum disorders

CHR

SNP

BP (hg19)

Effect allele

Fa

Nearest Gene

P(wald)

Type

8

rs2322600

27139408

G

0.14

TRIM35 (3 kb downstream)

6.48E-08

Imputed

8

rs35240189

27079834

G

0.104

STMN4 (10 kb downstream)

8.18E-08

Imputed

8

rs62503729

27083792

A

0.099

STMN4 (10 kb downstream)

8.83E-08

Imputed

8

rs13278976

27085479

T

0.099

STMN4 (10 kb downstream)

1.12E-07

Imputed

8

rs13270725

27085587

C

0.099

STMN4 (10 kb downstream)

1.13E-07

Imputed

8

rs34759235

27071936

G

0.104

STMN4 (10 kb downstream)

1.27E-07

Imputed

8

rs4733041

27113678

A

0.106

STMN4 (intron)

1.53E-07

Imputed

8

rs11135988

27112923

T

0.106

STMN4 (intron)

1.55E-07

Imputed

8

rs12542830

27111998

C

0.106

STMN4 (intron)

1.57E-07

Imputed

8

rs12542220

27111546

C

0.106

STMN4 (intron)

1.58E-07

Imputed

8

rs12542148

27111265

C

0.106

STMN4(intron)

1.59E-07

Imputed

8

rs12549968

27108413

C

0.106

STMN4 (intron)

1.69E-07

Imputed

8

rs12541011

27104497

C

0.106

STMN4 (intron)

1.83E-07

Imputed

8

rs4733039

27101046

C

0.106

STMN4 (intron)

1.90E-07

Imputed

8

rs3739213

27100014

G

0.106

STMN4 (intron)

1.96E-07

Imputed

8

rs12550034

27096145

G

0.106

STMN4 (intron)

2.06E-07

Imputed

8

rs1562331

27097746

G

0.106

STMN4 (intron)

2.06E-07

Genotypeda

8

rs12675791

27094644

G

0.106

STMN4 (intron)

2.06E-07

Imputed

8

rs2322606

27186923

A

0.169

PTK2B (intron)

2.40E-07

Genotypeda

8

rs12546017

27118605

A

0.105

STMN4 (3 kb downstream)

3.12E-07

Imputed

8

rs10097861

27188518

G

0.19

PTK2B (intron)

3.20E-07

Genotypeda

8

rs11782061

27188980

T

0.191

PTK2B (intron)

3.46E-07

Imputed

8

rs12541668

27105399

C

0.099

STMN4 (intron)

3.54E-07

Imputed

8

rs3739214

27101279

C

0.099

STMN4 (5’-utr)

3.72E-07

Imputed

11

rs11512467

117835174

C

0.423

IL10RA (20 kb upstream)

3.77E-07

Imputed

6

rs11970233

7962158

C

0.198

TXNDC5 (intron)

4.10E-07

Imputed

11

rs12790242

117842292

G

0.421

IL10RA (20 kb upstream)

4.16E-07

Imputed

8

rs4733043

27113883

G

0.112

STMN4 (intron)

4.75E-07

Imputed

  1. aF: frequency of the effect allele
Back to article page

BMC Genomics

ISSN: 1471-2164

Contact us