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Fig. 3 | BMC Genomics

Fig. 3

From: An integrated analysis tool for analyzing hybridization intensities and genotypes using new-generation population-optimized human arrays

Fig. 3

Whole-genome AF plots of 15 individuals genotyped using Array 6.0 and Axiom arrays. The panels of the plot on the left- and right-hand sides are the results of Array 6.0 and Axiom arrays, respectively. In each panel, the whole-genome plots of the intensity-based AF values with the CPA + LIM adjustment of 15 individuals are shown from the top to the bottom, as indicated by the numbers from 1 to 15. In each AF plot, each point represents a SNP probe. The vertical axis is the estimated AF, ranging from 0 to 1, and the horizontal axis is the physical position (Mb) on each of the 23 chromosomes

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