Table 1 Statistics, number of differentially expressed transcript and predicted effectors for the de novo RNA-seq assemblies generated in this project for Myzus persicae genotype O, J and F, M. cerasi and Rhopalosiphum padi
| Â | M. cerasi | R. padi | M. persicae genotype O | M. persicae genotype F | M. persicae genotype J |
|---|---|---|---|---|---|
Unigenes from CDS | 28,408 | 28,542 | 23,822 | 24,742 | 21,441 |
Transcripts: | 126,245 | 35,426 | 125,222 | 122,733 | 108,577 |
Components (genes): | 60,095 | 32,357 | 62,850 | 63,350 | 55,644 |
Percent GC: | 34.6 | 36.3 | 34.6 | 34.5 | 34.3 |
Total assembled bases: | 193,365,154 | 22,967,672 | 192,529,031 | 168,958,624 | 164,626,862 |
Upregulated head | 1410 | 950 | 1370 | 3762 | 1383 |
Secreted | 144 | 165 | 276 | 541 | 355 |
Secreted w/NLS | 12 | 18 | 45 | 84 | 64 |
Upregulated bodies | 848 | 893 | 796 | 2575 | 2692 |
Secreted | 64 | 94 | 133 | 252 | 278 |
Secreted w/NLS | 3 | 10 | 9 | 25 | 28 |