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Table 4 KOG analysis of genes with FPKM Values ≥ 1000 and ≥100

From: A transcriptomic insight into the infective juvenile stage of the insect parasitic nematode, Heterorhabditis indica

KOG function Function ID Gene count
FPKM >1000
Translation, ribosomal structure and biogenesis J 27
Posttranslational modification, protein turnover, chaperones O 10
Multiple classes   9
Intracellular trafficking, secretion, and vesicular transport U 7
Lipid transport and metabolism I 7
Cytoskeleton Z 4
Defense mechanisms V 2
Energy production and conversion C 2
General function prediction only R 2
Transcription K 2
Carbohydrate transport and metabolism G 1
Chromatin structure and dynamics B 1
Extracellular structures W 1
Inorganic ion transport and metabolism P 1
Grand total   76
FPKM >100   
Posttranslational modification, protein turnover, chaperones O 279
Multiple classes   264
General function prediction only R 235
Translation, ribosomal structure and biogenesis J 189
Function unknown S 160
Intracellular trafficking, secretion, and vesicular transport U 155
Signal transduction mechanisms T 131
Energy production and conversion C 124
RNA processing and modification A 119
Transcription K 108
Cytoskeleton Z 90
Lipid transport and metabolism I 84
Carbohydrate transport and metabolism G 77
Amino acid transport and metabolism E 66
Inorganic ion transport and metabolism P 53
Cell cycle control, cell division, chromosome partitioning D 39
Replication, recombination and repair L 36
Nucleotide transport and metabolism F 25
Chromatin structure and dynamics B 24
Secondary metabolites biosynthesis, transport and catabolism Q 21
Extracellular structures W 18
Coenzyme transport and metabolism H 18
Cell wall/membrane/envelope biogenesis M 15
Defense mechanisms V 13
Nuclear structure Y 1
Cell motility N 1
Grand total   2345