Table 4 KOG analysis of genes with FPKM Values ≥ 1000 and ≥100

Translation, ribosomal structure and biogenesis

J

27

Posttranslational modification, protein turnover, chaperones

O

10

Multiple classes

9

Intracellular trafficking, secretion, and vesicular transport

U

7

Lipid transport and metabolism

I

7

Cytoskeleton

Z

4

Defense mechanisms

V

2

Energy production and conversion

C

2

General function prediction only

R

2

Transcription

K

2

Carbohydrate transport and metabolism

G

1

Chromatin structure and dynamics

B

1

Extracellular structures

W

1

Inorganic ion transport and metabolism

P

1

Grand total

76

FPKM >100

Posttranslational modification, protein turnover, chaperones

O

279

Multiple classes

264

General function prediction only

R

235

Translation, ribosomal structure and biogenesis

J

189

Function unknown

S

160

Intracellular trafficking, secretion, and vesicular transport

U

155

Signal transduction mechanisms

T

131

Energy production and conversion

C

124

RNA processing and modification

A

119

Transcription

K

108

Cytoskeleton

Z

90

Lipid transport and metabolism

I

84

Carbohydrate transport and metabolism

G

77

Amino acid transport and metabolism

E

66

Inorganic ion transport and metabolism

P

53

Cell cycle control, cell division, chromosome partitioning

D

39

Replication, recombination and repair

L

36

Nucleotide transport and metabolism

F

25

Chromatin structure and dynamics

B

24

Secondary metabolites biosynthesis, transport and catabolism

Q

21

Extracellular structures

W

18

Coenzyme transport and metabolism

H

18

Cell wall/membrane/envelope biogenesis

M

15

Defense mechanisms

V

13

Nuclear structure

Y

1

Cell motility

N

1

Grand total

2345