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Table 2 Functional categories of phenotype-specific transport activity and response to stress genes expressed in tip-burn susceptible and resistant cabbages and kale

From: Intracellular Ca2+ and K+ concentration in Brassica oleracea leaf induces differential expression of transporter and stress-related genes

Functional category

Class 1

Class 2

Class 3

Class 4

Transport activity

    

 Ca2+ activated outward rectifying K+ channel

1

1

  

 Intracellular protein transport

 

11

5

4

 ABC transporter

 

2

1

1

 Lipid transporter

 

1

1

1

 Phosphate transporter

 

1

1

1

 MATE efflux family

 

4

3

 

 Sugar transporter

 

3

1

 

 K+ transporter

 

3

1

 

 Vacuolar protein sorting-related

 

2

1

 

 Vesicle transport protein

 

1

1

 

 Nodulin MtN21/EamA-like transporter

 

1

2

 

 Aluminium activated malate transporter

 

1

  

 Cation/H+ exchanger

 

1

  

 ATP/ADP transporter

 

2

  

 Iron-regulated transporter

 

1

  

 Heavy metal transporter

 

1

  

 UDP-galactose transporter

 

1

  

 Urea transmembrane transporter

 

1

  

 Zinc ion transporter

 

1

  

 Anion channel

  

1

 

 Calcium ion transporter

  

1

 

 Inositol transporter

  

1

 

 Manganese tracking factor

  

1

 

 Nitrate transmembrane transporter

  

1

 

 Nuclear transporter

  

1

 

 Peptide transporter

  

1

 

 Phosphatidylinositol transfer protein

   

1

 Magnesium transporter

   

1

Response to stress

    

 Heat-shock stress related

 

6

3

1

 Disease resistance protein

 

4

10

5

 Abiotic stress related

 

2

2

2

 Osmotic stress

 

3

4

 

 Light stress related

 

2

4

 

 Cold-stress and salt responsive protein

 

1

1

 

 Photoxidative stress related

 

1

  

 Drought stress related

  

1

 

 Cold-stress related

  

1

 
  1. Class 1, specific for tip-burn susceptible phenotype; class 2, up-regulated in tip-burn resistant cabbage and kale; class 3, specific for kale; class 4, up- or down-regulated in all leaf segments compared to LA of tip burn-susceptible cabbage