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Table 1 Descriptions of the bacterial genomes and sequence reads that were used in this paper. All data sets are paired-end reads

From: HGA: de novo genome assembly method for bacterial genomes using high coverage short sequencing reads

Dataset Genome GC content Sequencing Read Fragment Avg. #
  size (Mb) (%) technology length (bp) length (bp) Coverage Proteins
Bacillus cereus ATCC 10987 5.4 35 MiSeq 250 600 100x 6,014
Mycobacterium abscessus 6G 5.1 64 HiSeq 100 335 115x 4,992
Mycobacterium abscessus 6G 5.1 64 MiSeq 250 335 100x 4,992
Rhodobacter sphaeroides 2.4.1 4.6 69 HisSeq 101 220 210x 4,474
Rhodobacter sphaeroides 2.4.1 4.6 69 MiSeq 251 540 100x 4,474
Vibrio cholerae CO1032(5) 4.0 48 HiSeq 100 335 110x 3,693
Vibrio cholerae CO1032(5) 4.0 48 MiSeq 250 335 100x 3,693