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Table 1 Lung: Distribution of SNVs by Region

From: Multivariate models from RNA-Seq SNVs yield candidate molecular targets for biomarker discovery: SNV-DA

Region

Total set

Filtered set

3’ UTR

27,626

12,570

exonic

25,788

10,870

intronic

21,706

4,847

nonsynonymous exonic

11,804

4,334

intergenic

12,867

2,460

ncRNA

4,062

1,285

5’ UTR

2,519

928

up/downstream

1,669

448

RNA-editing

1,627

430

All SNVs

96,025

33,467

  1. The distribution of called SNVs by region of origin in the NSCLC dataset. A filtered set is created by only including SNVs that have at least three samples with non-zero allele fractions
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BMC Genomics

ISSN: 1471-2164

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