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Fig. 5 | BMC Genomics

Fig. 5

From: RNA-seq analysis of the Rhizobium tropici CIAT 899 transcriptome shows similarities in the activation patterns of symbiotic genes in the presence of apigenin and salt

Fig. 5

Alignment of NB sequences from R. tropici CIAT 899. Software fuzznuc of the EMBOSS package was used to identify nod box-like sequences. Hits were selected based on their conservation to previously identified NB sequences. Searching of these consensus sequences was carried out on the whole genome of R. tropici CIAT 899. DNA sequences were aligned using the ClustalW program and manipulated with Boxshade at EMBnet. Dark and gray boxes indicate identical and similar nucleotides, respectively. Promoter consensus motifs are marked with an asterisk on the consensus line

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BMC Genomics

ISSN: 1471-2164

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