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Table 7 Categories of fungal effectors and effector families in the C. graminicola genome and transcriptome

From: A Colletotrichum graminicola mutant deficient in the establishment of biotrophy reveals early transcriptional events in the maize anthracnose disease interaction

  TOTAL GENOME TOP100 WTAP TOP100WTBT TOP100WTNT TOP100MTAP TOP100MTBT WTAP_WTBT_Up WTAP_WTBT_Dn WTBT_WTNT_Up WTBT_WTNT_Dn MTAP_MTBT_Dn WTAP_MTAP_Up WTAP_MTAP_Dn WTBT_MTBT_Up WTBT_MTBT_Dn
Total SSP 687 18 11 8 13 14 43 62 62 75 4 17 7 29 44
SSP-CR 251 12 6 3 9 7 18 21 31 23 1 9 1 12 12
Lineage-specific SSP 54 3 1 0 2 4 3 1 9 3 0 5 0 0 1
GH61 motif SSPa 14 0 0 1 0 0 0 3 0 8 0 0 1 1 1
CFEM motif SSPb 11 0 0 0 0 0 1 0 1 0 0 0 1 0 2
  1. aSSP that belong to family 61 of the Glycosyl Hydrolase Cazymes. This is a very large family of fungal enzymes that is thought to play an important role in lignocellulose degradation. These effectors are expressed later during infection, primarily during NT
  2. bSSP with a CFEM domain. CFEM proteins contain a conserved domain that includes eight cysteine residues. Many fungal proteins with CFEM domains have been shown to have roles in pathogenicity