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Table 7 Top 10 transcripts for the PIF analysis based on adjusted p-value. The transcript ID, gene symbol and gene are shown, together with the adjusted p-value and the PIF score

From: Bioinformatic analyses in early host response to Porcine Reproductive and Respiratory Syndrome virus (PRRSV) reveals pathway differences between pigs with alternate genotypes for a major host response QTL

Transcript_id

Gene symbol

Gene

adj.P.Val

PIF.value

ENSSSCT00000025260

ACTB

beta actin

5.11E-93

136.357

ENSSSCT00000031794

EEF2

eukaryotic translation elongation factor 2

1.25E-93

118.423

ENSSSCT00000006982

ARHGAP30

Rho GTPase-Activating Protein 30

9.51E-96

103.526

ENSSSCT00000031940

CALM1

calmodulin 1

3.94E-96

96.954

ENSSSCT00000013301

SH3KBP1

SH3-domain kinase binding protein 1

2.29E-94

74.865

ENSSSCT00000024405

PSMD2

proteasome 26S subunit, non-ATPase, 2

7.17E-99

73.512

ENSSSCT00000003036

AP1G1

AP-1 complex subunit gamma-1

2.20E-100

67.972

ENSSSCT00000018259

VPS41

vacuolar protein sorting 41

4.95E-96

64.869

ENSSSCT00000015192

C19ORF50

a.k.a. KxDL Motif-Containing Protein 1

2.40E-93

61.293

ENSSSCT00000019336

KIAA0100

breast Cancer Overexpressed Gene 1

2.13E-94

58.151