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Table 4 Transcripts involved in the pathway of plant-pathogene interaction

From: De novo analysis of transcriptome reveals genes associated with leaf abscission in sugarcane (Saccharum officinarum L.)

Gene family

gene_id

log2FC(Q1/Q2)

PValue

log2FC(T/B)

PValue

Description

RX24L

c97780_g1_i3

3.228

#######

6.523

#######

Probable disease resistance protein RXW24L

 

c105254_g1_i2

1.990

#######

2.181

#######

Calcium-dependent protein kinase isoform 11

DRL

c101464_g2_i5

2.348

#######

2.145

#######

Putative disease resistance protein At1g50180

 

c77488_g1_i1

2.807

#######

6.112

#######

 
 

c93620_g2_i1

5.716

#######

5.264

#######

 

c97780_g3_i1

6.722

#######

5.438

#######

 

c142188_g1_i1

3.527

#######

4.753

#######

Probable disease resistance protein RDL6

ERECT

c105005_g2_i1

3.139

#######

1.797

#######

LRR receptor-like serine/threonine-protein kinase ERECTA

FB95

c82142_g1_i1

2.097

#######

7.978

#######

F-box protein At2g02240

FLS2

c104719_g1_i2

6.103

#######

2.347

#######

LRR receptor-like serine/threonine-protein kinase FLS2

HSP82

c108102_g3_i1

3.494

#######

2.543

#######

Heat shock protein 82

 

c76241_g1_i1

2.373

#######

2.374

#######

LRC40

c15793_g1_i1

5.998

#######

5.839

#######

Leucine-rich repeat-containing protein 40

LRK91

c99649_g1_i3

5.808

#######

5.880

#######

L-type lectin-domain containing receptor kinase IX.1

MPK5

c83394_g1_i1

4.061

#######

1.615

#######

Mitogen-activated protein kinase 5

R13L family

c105793_g1_i13

2.664

#######

2.311

#######

Putative disease resistance RPP13-like protein 2

 

c105793_g1_i8

8.150

#######

4.113

#######

 

c105793_g1_i9

1.563

#######

7.504

#######

 

c67555_g1_i1

3.908

#######

2.860

#######

Putative disease resistance RPP13-like protein 3

 

c101028_g2_i1

9.403

#######

8.190

#######

Disease resistance RPP13-like protein 4

 

c101028_g2_i5

8.861

#######

6.967

#######

R1B

c104414_g3_i1

4.078

#######

4.774

#######

Putative late blight resistance protein homolog R1B-12

 

c82142_g2_i1

2.352

#######

6.412

#######

 

c97780_g2_i3

2.354

#######

6.259

#######

 

c105793_g1_i1

3.268

#######

1.792

#######

Putative late blight resistance protein homolog R1B-16

 

c68709_g1_i1

3.122

#######

3.125

#######

RGA

c91884_g5_i3

1.449

#######

2.760

#######

Putative disease resistance protein RGA3

 

c102886_g1_i4

5.643

#######

2.903

#######

Putative disease resistance protein RGA4

 

c91884_g5_i4

2.167

#######

2.247

#######

RP8L3

c97780_g1_i1

7.405

#######

6.223

#######

Disease resistance RPP8-like protein 3

 

c97780_g1_i5

5.565

#######

6.223

#######

RPM1

c107814_g1_i1

2.025

#######

1.350

#######

Disease resistance protein RPM1

 

c108644_g1_i2

2.759

#######

2.277

#######

 

c66665_g1_i1

9.403

#######

7.371

#######

 

c68216_g1_i1

9.485

#######

5.894

#######

 

c95380_g2_i1

8.265

#######

9.699

#######

 

c95380_g2_i2

8.438

#######

9.519

#######

 

c99461_g1_i2

2.318

#######

3.144

#######

RPP

c104393_g1_i1

3.763

#######

3.659

#######

Disease resistance protein RPP13

 

c104393_g1_i3

3.376

#######

5.385

#######

 

c104393_g1_i8

2.979

#######

3.708

#######

 

c104393_g1_i9

2.827

#######

2.926

#######

 

c107654_g2_i3

2.151

#######

2.678

#######

 

c89572_g4_i3

1.611

#######

3.859

#######

 

c97780_g5_i1

2.086

#######

5.392

#######

RSLE2

c99739_g2_i1

2.603

#######

1.697

#######

Zinc finger BED domain-containing protein RICESLEEPER 2

 

c99739_g2_i3

8.733

#######

3.065

#######

 

c99739_g2_i7

9.022

#######

2.909

#######

SD25

c99065_g1_i9

6.315

#######

5.297

#######

G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5

WAK1

c48856_g1_i1

11.447

#######

11.123

#######

Wall-associated receptor kinase 1

WRK33

c99739_g2_i8

6.689

#######

3.657

#######

Probable WRKY transcription factor 33

Y1571

c103804_g1_i1

6.863

#######

2.780

#######

Probable leucine-rich repeat receptor-like protein kinase At1g35710

 

c103804_g1_i2

6.400

#######

2.506

#######

Y3475

c103043_g1_i3

4.158

#######

3.636

#######

Probable LRR receptor-like serine/threonine-protein kinase At3g47570

 

c104719_g1_i1

6.051

#######

2.048

#######

Y4885

c103804_g1_i3

6.967

#######

3.236

#######

Probable LRR receptor-like serine/threonine-protein kinase At4g08850

 

c105253_g3_i2

4.866

#######

2.290

#######

gi|414591554|tpg|DAA42125.1|

c101028_g1_i1

7.789

#######

6.349

#######

TPA: hypothetical protein ZEAMMB73_852544 [Zea mays]

gi|242077232|ref|XP_002448552.1|

c65099_g1_i1

3.245

#######

2.407

#######

hypothetical protein SORBIDRAFT_06g028920 [Sorghum bicolor]

 

c65099_g1_i2

2.978

#######

1.949

#######

gi|242047620|ref|XP_002461556.1|

c75847_g1_i2

5.808

#######

6.270

#######

hypothetical protein SORBIDRAFT_02g004690 [Sorghum bicolor]

gi|115489000|ref|NP_001066987.1|

c91026_g3_i1

1.813

#######

5.859

#######

Os12g0553200 [Oryza sativa Japonica Group]

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BMC Genomics

ISSN: 1471-2164

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