Table 2 Distribution of fixed SNPs in both control group and desiccation group
Categories | # of SNPs | % of SNPs | Sequencing coverage | Density of SNP (per Kb) |
|---|---|---|---|---|
intergenic | 6,808 | 33.73 | 33,640,807 | 0.20 |
5′-UTR | 533 | 2.64 | 4,011,958 | 0.13 |
CDS (synonymous) | 2,056 | 10.19 | 22,691,151 | 0.12 |
CDS (non-synonymous) | 745 | 3.69 | ||
Intron | 9,108 | 45.12 | 51,989,650 | 0.18 |
3′-UTR | 755 | 3.74 | 6,599,093 | 0.11 |
ncRNA | 181 | 0.90 | 1,138,125 | 0.16 |
Total: | 20,186 | 100.00 | 120,070,784 | 0.17 |