From: Screening of whole genome sequences identified high-impact variants for stallion fertility
 | Allele | Genotype | |||
---|---|---|---|---|---|
Polymorphism | MA | MAF | AA | AB | BB |
g.26775767G>C | C | 0.0865 | 0.855 | 0.116 | 0.028 |
NEURL1 | Â | Â | 272/318 | 37/318 | 9/318 |
g.77472655G>C | C | 0.1266 | 0.759 | 0.228 | 0.013 |
KDR | Â | Â | 243/320 | 73/320 | 4/320 |
g.74610774C>T | T | 0.0018 | 0.997 | 0.004 | 0 |
CFTR | Â | Â | 283/284 | 1/284 | Â |
g.56937215C>T | T | 0.0556 | 0.889 | 0.111 | 0 |
OVGP1 | Â | Â | 208/234 | 26/234 | Â |
g.45985131A>G | G | 0.0158 | 0.968 | 0.032 | 0 |
FBXO43 | Â | Â | 306/316 | 10/316 | Â |
g.82699661C>T | T | 0.0338 | 0.933 | 0.068 | 0 |
TSSK6 | Â | Â | 290/311 | 21/311 | Â |
g.7083659A>T | T | 0.2919 | 0.509 | 0.398 | 0.093 |
SLC9A3R1 | Â | Â | 164/322 | 128/322 | 30/322 |
g.40694339G>A | A | 0.0062 | 0.988 | 0.013 | 0 |
PKD1 | Â | Â | 317/321 | 4/321 | Â |
g.6704968C>T | T | 0.0125 | 0.978 | 0.019 | 0.003 |
GHRL | Â | Â | 314/321 | 6/321 | 1/321 |
g.19034281C>T | T | 0.0522 | 0.896 | 0.104 | 0 |
FOXP1 | Â | Â | 283/316 | 33/316 | Â |
g.32635273T>C | C | 0.3064 | 0.610 | 0.168 | 0.223 |
BTNL2 | Â | Â | 200/328 | 55/328 | 73/328 |
g.35255390T>C | C | 0.0110 | 0.978 | 0.022 | 0 |
TCP11 | Â | Â | 310/317 | 7/317 | Â |
g.4323852G>A | A | 0.0047 | 0.991 | 0.009 | 0 |
SPATA31E1 | Â | Â | 318/321 | 3/321 | Â |
g.37453246G>C | C | 0.0113 | 0.978 | 0.023 | 0 |
NOTCH1 | Â | Â | 304/311 | 7/311 | Â |
g.37455302G>A | A | 0.1341 | 0.753 | 0.226 | 0.021 |
NOTCH1 | Â | Â | 247/328 | 74/328 | 7/328 |
g.79813487A>T | T | 0 | 1 | 0 | 0 |
ENSECAG00000020135 | Â | Â | 74/74 | Â | Â |
g.25184403G>C | C | 0 | 1 | 0 | 0 |
ENSECAG00000021286 | Â | Â | 74/74 | Â | Â |