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Table 2 Functional categories of up-regulated genes

From: A subtracted cDNA library identifies genes up-regulated during PHOT1-mediated early step of de-etiolation in tomato (Solanum lycopersicum L.)

BIN categories Number of sequences
Photosynthesis 1
Minor carbohydrates 3
Glycolysis 1
Fermentation 1
Mitochondrial electron transport/ATP synthesis 4
Cell wall 7
Lipid metabolism 3
Amino acid metabolism 7
Stress 11
Redox 2
Miscellaneous enzyme families 4
RNA: processing, transcription, regulation of transcription 12
DNA: synthesis/chromatin structure, repair 4
Protein: synthesis, targeting, postranslation modification, degradation 33
Signalling 8
Cell organisation 3
Cell cycle 1
Cell, vesicle transport 2
Development 5
Transport 12
No ontology 8
Unknown 19