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Table 2 List of predicted genes involved in oxidative stress of Serratia sp. LCN16 genome. Genes descriptions based on KEGG [69]

From: The genome and genetics of a high oxidative stress tolerant Serratia sp. LCN16 isolated from the plant parasitic nematode Bursaphelenchus xylophilus

KEGG

EC

Description

Predicted gene

K00799

2.5.1.18

Glutathione S-transferase

gst

LCN16_01390

LCN16_01491

LCN16_01648

LCN16_02242

LCN16_03108

LCN16_03382

LCN16_04377

K03782

1.11.1.21

Catalase-peroxidase

katG

LCN16_03210

K03781

1.11.1.6

Catalase

katA

LCN16_03339

K04565

1.15.1.1

Superoxide dismutase Cu-Zn

sod1

LCN16_02232

K04564

1.15.1.1

Superoxide dismutase Fe-Mn

sod2

LCN16_00084

K04564

1.15.1.1

Superoxide dismutase Fe-Mn

sod2

LCN16_02218

K00432

1.11.1.9

Glutathione peroxidase

gpx

LCN16_02167

gpx

LCN16_02187

gpx

LCN16_04689

K00384

1.8.1.9

Thioredoxin

trxB

LCN16_01650

trx

LCN16_00969

K00383

1.8.1.7

Glutathione reductase

gorA

LCN16_04647

K03674

1.20.4.1

Glutaredoxin

grxA

LCN16_01610

K07390

1.20.4.2

grxD

LCN16_02220

K03675

1.20.4.3

grxB

LCN16_02844

K03386

1.11.1.15

Alkyl hydroperoxide

ahpD

LCN16_03826

K04761

-

Hydrogen-peroxide transcriptional regulator

oxyR

LCN16_04688

K11065

1.11.1.-

Thiol peroxidase

tpx_1

LCN16_02660

tpx_2

LCN16_03583

-

-

Organic hydroperoxide resistance transcriptional regulator

ohrR

LCN16_00141

-

-

Organic hydroperoxide resistance protein

ohrB

LCN16_00142

K13892

-

Glutathione ABC transporter

gsiA

LCN16_01509

K13889

-

gsiB

LCN16_01510

K13890

-

gsiC

LCN16_01511

K13891

-

gsiD

LCN16_01512

K01919

6.3.2.2

Glutamate-cysteine ligase

gshA

LCN16_00781

K18592

2.3.2.2

Gamma-glutamyltranspeptidase

ggt_1

LCN16_00968

ggt_2

LCN16_02503

K00430

1.8.-.-

Thiol-disulfide oxidoreductase

ykuV

LCN16_04070