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Table 4 A list of common GeAGs (Ratio > 10)

From: Comparative transcriptome analysis revealing dormant conidia and germination associated genes in Aspergillus species: an essential role for AtfA in conidial dormancy

   

FPKM ratio of 1 h-grown conidia to conidia

  

A. fumigatus

A. niger

A. oryzae

A. fumigatus

A. niger

A. oryzae

Gene name in Af

Annotation in A. fumigatus

Afu3g09690

An16g03330

AO090005001280

2140.3

7365.7

1063.5

-

Extracellular thaumatin domain protein, putative

Afu4g08110

An04g02550

AO090023000758

75.3

163.0

12.4

-

Translation elongation factor G1, putative

Afu4g07630

An04g02000

AO090023000812

53.9

74.1

11.6

-

Microtubule associated protein (Ytm1), putative

Afu6g02690

An12g08230

AO090120000155

48.5

87.3

16.2

mtfA

C2H2 finger domain protein, putative

Afu1g10990

An08g03290

AO090038000305

43.2

729.2

13.4

-

Ribosomal RNA processing protein, putative

Afu1g04370

An01g03230

AO090003000912

39.7

2627.6

18.7

-

Hypothetical protein

Afu1g05310

An01g04590

AO090003000828

39.1

194.0

13.0

-

DUF699 ATPase, putative

Afu2g10070

An16g04970

AO090011000630

35.6

11.6

26.2

-

Carbamoyl-phosphate synthase, large subunit

Afu4g07540

An04g01900

AO090023000821

35.1

42.8

11.6

-

Small nucleolar ribonucleoprotein complexsubunit, putative

Afu2g16040

An15g06390

AO090012000197

30.2

73.6

10.6

-

rRNA biogenesis protein, putative

Afu2g09860

An16g05290

AO090011000649

29.0

71.4

33.7

-

Purine-cytosine permease

Afu1g10440

An08g02390

AO090038000383

25.7

100.8

10.2

-

Conserved hypothetical protein

Afu7g04700

An13g01230

AO090005000164

25.5

11.8

28.7

-

Conserved hypothetical portein

Afu5g03870

An09g06310

AO090102000594

23.7

42.9

10.7

-

Conserved hypothetical protein

Afu4g06350

An04g00680

AO090023000955

23.6

130.8

10.3

-

rna binding protein

Afu3g06320

An11g10000

AO090020000118

21.3

29.8

14.0

-

Conserved hypothetical protein

Afu2g02190

An07g06640

AO090011000497

21.0

52.7

28.0

-

Hypothetical nuclear protein

Afu6g08720

An11g06110

AO090001000546

20.3

38.3

23.7

-

5’-methylthioadenosine phosphorylase

Afu4g03650

An14g01560

AO090011000292

20.1

68.9

12.4

-

Ribosome associated DnaJ chaperone Zuotin, putative

Afu6g13370

An08g09160

AO090003000462

17.9

10.0

11.3

utp10

SSU processome component (Utp10), putative

Afu2g05950

An02g14340

AO090001000712

17.2

28.2

14.7

-

snRNP and snoRNP protein (Snu13), putative

Afu3g13320

An02g09200

AO090012000801

17.0

14.3

10.7

rps0

40S ribosomal protein S0, putative

Afu1g15730

An01g14080

AO090005001132

16.9

31.5

10.4

-

Ribosomal protein S8

Afu2g17200

An04g09270

AO090102000099

16.8

26.2

11.1

-

Hypothetical protein

Afu2g11810

An02g03860

AO090026000462

16.7

77.0

16.8

-

Conserved hypothetical protein

Afu5g11470

An18g04470

AO090026000687

16.0

83.7

24.6

-

MYB DNA binding protein (Tbf1), putative

Afu5g06430

An17g01270

AO090009000609

15.7

76.2

10.5

-

Mitochondrial large ribosomal subunit L7, putative

Afu2g02150

An07g06760

AO090011000490

15.5

20.0

12.7

S10a

Ribosomal protein S10

Afu6g04330

An15g01160

AO090701000118

15.1

35.8

12.0

-

DEAH-box RNA helicase (Dhr1), putative

Afu1g05390

An18g04220

AO090009000405

14.8

28.8

10.6

-

Mitochondrial ADP,ATP carrier protein (Ant), putative

Afu1g11710

An08g03910

AO090038000249

13.9

16.2

13.2

-

60S ribosomal protein L1

Afu8g05330

An16g07400

AO090005000616

13.9

16.1

10.8

-

Methylenetetrahydrofolate dehydrogenase

Afu3g10800

An02g06530

AO090003000629

13.7

10.4

10.9

-

Eukaryotic translation initiation factor 3subunit CLU1/TIF31, putative

Afu3g11260

An02g07010

AO090003000679

13.6

37.3

16.5

ubiC

Ubiquitin (UbiC), putative

Afu3g12300

An02g08080

AO090005000737

13.4

20.5

11.2

-

Ribosomal L22e protein family

Afu5g12360

An14g06860

AO090120000354

13.3

15.2

12.8

-

Mitochondrial oxaloacetate transporter (Oac),putative

Afu3g06580

An11g09740

AO090020000342

13.1

38.1

14.1

-

WD repeat protein

Afu3g05490

An11g11150

AO090020000020

13.0

72.7

13.3

-

Nrap protein superfamily

Afu6g10460

An11g00990

AO090023000242

12.8

10.8

15.5

lag1

Ceramide synthase membrane component (Lag1),putative

Afu6g09990

An11g04985

AO090038000466

12.1

29.5

10.7

-

Importin beta-4 subunit, putative

Afu6g08580

An11g05510

AO090001000519

11.9

16.0

10.4

fkbp4

FKBP-type peptidyl-prolyl isomerase, putative

Afu3g10660

An02g06320

AO090003000611

11.5

23.0

47.8

erg13

Hydroxymethylglutaryl-CoA synthase

Afu4g13170

An01g08850

AO090009000264

11.2

23.6

16.9

cpcB

Guanine nucleotide-binding protein subunit, putative

Afu3g00880

An09g03120

AO090003001496

11.1

486.0

48.1

-

Conserved hypothetical protein

Afu6g09060

An11g06810

AO090001000583

10.7

50.8

11.3

-

Mitochondrial 60S ribosomal protein L6precursor

Afu2g03380

An07g07840

AO090120000249

10.6

15.7

11.2

-

Alkaline serine protease