Theobroma cacao L. pathogenesis-related gene tandem array members show diverse expression dynamics in response to pathogen colonization

Table 3 Regulation of Criollo PR genes as detected by microarray

		P. palmivora		C. theobromicola
	Number removed in background filtration (Average Log₂ Normalized Expression <6)	Up-regulated	Down-regulated	Up-regulated	Down-regulated
PR-1	7/14	1/14	0/14	1/14	0/14
PR-2	11/43	5/43	2/43	4/43	0/43
PR-3	1/11	8/11	0/11	5/11	0/11
PR-4	1/8	3/8	0/8	3/8	0/8
PR-5	6/30	6/30	0/30	5/30	0/30
PR-6	2/8	5/8	0/8	2/8	0/8
PR-7	21/54	2/54	3/54	1/54	0/54
PR-8	9/14	2/14	0/14	2/14	0/14
PR-9	26/81	12/81	1/81	7/81	0/81
PR-10	13/23	8/23	0/23	6/23	0/23
PR-11	5/11	3/11	0/11	3/11	0/11
PR-12	3/3	0/3	0/3	0/3	0/3
PR-14	3/16	2/16	0/16	2/16	0/16
PR-16	16/38	7/38	1/38	1/38	0/38
PR-17	2/5	3/5	0/5	3/5	0/5
Total	126/359	67/359	7/359	45/359	0/359

Counts of up- and down-regulated genes represent the number of genes with Benjamini-Hochberg p < 0.05

ISSN: 1471-2164