Table 1 Relative abundance of significantly different OTUs of the healthy core from Spanish (Sp) and British (UK) farms
Taxonomy | Relative abundance (%) | |||||
|---|---|---|---|---|---|---|
Phylum | Class | Order | Family | Genus | Sp core | UK core |
Bacteroidetes | 27.6202 | 29.3460 | ||||
Bacteroidia | Bacteroidales | 12.3122 | 23.0031 | |||
Rikenellaceae | 1.3096 | 4.6966 | ||||
S24-7 | 2.1583 | 7.7633 | ||||
Prevotellaceae | 5.5314 | 1.7105 | ||||
Prevotella | 5.3730 | 1.6850 | ||||
Odoribacteraceae | 0.1273 | 1.0529 | ||||
Odoribacter | 0.1273 | 1.0529 | ||||
Bacteroidaceae | 2.5661 | 8.5857 | ||||
Bacteroides | 2.4499 | 8.4674 | ||||
Flavobacteriia | Flavobacteriales | Weeksellaceae | 19.6512 | 17.7220 | ||
Weeksella | 21.7857 | 6.4157 | ||||
Deferribacteres | 0.3435 | 1.3969 | ||||
Deferribacteres | Deferribacterales | Deferribacteraceae | 0.3435 | 1.3969 | ||
Mucispirillum | 0.3435 | 1.3969 | ||||
Cyanobacteria | 0.4103 | 1.1756 | ||||
4C0d-2 | YS2 | 0.2043 | 1.1571 | |||
Firmicutes | 28.0177 | 40.4671 | ||||
Clostridia | Clostridiales | 4.4292 | 12.2484 | |||
Clostridiaceae | 2.7209 | 0.6808 | ||||
Lachnospiraceae | 5.2361 | 7.7619 | ||||
Ruminococcaceae | 6.3337 | 11.4209 | ||||
Oscillospira | 3.6856 | 10.0053 | ||||
Ruminococcus | 0.6039 | 1.3945 | ||||
Bacilli | Lactobacillales | Lactobacillaceae | 3.3117 | 1.1864 | ||
Lactobacillus | 3.3056 | 1.1826 | ||||
Streptococcaceae | 5.5737 | 3.9812 | ||||
Streptococcus | 5.4903 | 3.8330 | ||||
Aerococcaceae | 0.2347 | 1.2245 | ||||
Aerococcus | 0.2036 | 1.1799 | ||||
Proteobacteria | 41.8425 | 24.0760 | ||||
Alphaproteobacteria | RF32 | 0.3869 | 1.8664 | |||
Betaproteobacteria | Neisseriales | Neisseriaceae | 1.4205 | 1.0527 | ||
Gammaproteobacteria | Enterobacteriales | Enterobacteriaceae | 5.0675 | 1.6001 | ||
Pasteurellales | Pasteurellaceae | 7.8926 | 2.3031 | |||
Haemophilus | 9.2309 | 1.9811 | ||||
Pseudomonadales | Moraxellaceae | 31.9200 | 18.7081 | |||