RNA-seq analysis of virR and revR mutants of Clostridium perfringens

BMC Genomics

Table 2 Differentially expressed sRNAs in the virR and revR mutants

Strain	sRNA	Gene 1	Product 1^a,b	Gene 2	Product 2^a,b	log₂ fold change
virR mutant	SR45	eutQ	entanolamine utilization protein	btuE	glutathione peroxidase	2.19
virR mutant	SR67	valS	valine-tRNA ligase	cpe1920	hypothetical protein	1.85
revR mutant	SR7	mviM	dehydrogenase	nirC	nitrite transporter	−3.74
	SR27	cpe0454	membrane protein	cpe0455	alkaline phosphatase-like protein	−2.54
	SR77	ddpA	oligopeptide transporter	narK	nitrate extrusion protein	−2.62
	SR82	bglB	beta-glucosidase	putA	aldehyde dehydrogenase	−1.97

^aAs defined by FDR < 0.01; log₂ fold change >1
^bGene 1 and gene 2 are used to designate the genes on each side on the postulated sRNA gene

ISSN: 1471-2164