Table 1 Summary of ROH consensus regions present amongst all 3 populations, by chromosome
From: Genomic analysis of Ugandan and Rwandan chicken ecotypes using a 600 k genotyping array
Chr | N (Consensus) | Mean (# of birds) | Mean ROH length (Kb) | Sum ROH length (Kb) | Mean number Of SNPs | Sum Of SNPs |
|---|---|---|---|---|---|---|
1 | 46 | 13.83 | 298.88 | 13748.66 | 124.37 | 5721 |
2 | 20 | 16.70 | 572.33 | 11446.66 | 198.65 | 3973 |
3 | 17 | 12.65 | 326.66 | 5553.24 | 144.35 | 2454 |
4 | 21 | 17.19 | 153.77 | 3229.19 | 64.00 | 1344 |
5 | 9 | 14.33 | 482.82 | 4345.38 | 153.00 | 1377 |
6 | 4 | 10.75 | 256.77 | 1027.10 | 143.50 | 574 |
7 | 7 | 13.43 | 211.29 | 1479.02 | 102.14 | 715 |
8 | 6 | 21.33 | 218.13 | 1308.76 | 107.17 | 643 |
9 | 3 | 11.67 | 204.61 | 613.82 | 138.67 | 416 |
10 | 7 | 11.57 | 171.48 | 1200.37 | 158.29 | 1108 |
11 | 3 | 20.67 | 371.64 | 1114.93 | 207.00 | 621 |
12 | 1 | 12.00 | 1252.64 | 1252.64 | 778.00 | 778 |
13 | 1 | 10.00 | 984.15 | 984.15 | 408.00 | 408 |
14 | 1 | 18.00 | 1034.33 | 1034.33 | 645.00 | 645 |
15 | 2 | 10.50 | 239.67 | 479.33 | 182.50 | 365 |
19 | 2 | 13.00 | 511.86 | 1023.72 | 276.50 | 553 |