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Table 1 Primer sequencing for qRT-PCR

From: A de novo transcriptome analysis shows that modulation of the JAK-STAT signaling pathway by salmonid alphavirus subtype 3 favors virus replication in macrophage/dendritic-like TO-cells

Primer name

Sequence

GeneBank accession no

SAV-3 E2-F

CAGTGAAATTCGATAAGAAGTGCAA

EF675594

SAV-3 E2-R

TGGGAGTCGCTGGTAAAGGT

β-actin-F

CCAGTCCTGCTCACTGAGGC

AF012125

β-actin-R

GGTCTCAAACATGATCTGGGTCA

STAT1-F

CGGGCCCTGTCACTGTTC

GQ325309

STAT1-R

GGCATACAGGGCTGTCTCT

STAT2-F

AAAACCCCCTCCTCTTCCTC

NM_001145424

STAT2-R

TTAGCCTCCAGTGTGTTCC

IFNGR1-F

TCAAACACTTCCCTCTACCAC

EU244876

IFNGR1-R

GTATTCTGTCCAACAGCAGTC

IFNGR2-F

AGTCCATCCAAGAGTCAGAAAG

EU244877

IFNGR2-R

CCACTACCAAGACACCCAAC

IL-10RB-F

ATCAGTCAGTCTCGACTCGC

BT047745

IL-10RB-R

TCACCCATATCTTCCCCATCC

IL-20RA-F

TTCAACCTGCTCTCAGTCC

NM_001141080

IL-20RA-R

GCCTTCATCATCATCTTCTTCC

IL-15RA-F

TGTGTCTCCAACAGAACCCC

NM_001124572

IL-15RA-R

TTACTACCACCCCACCTACACC

IL-13RA-F

GCTTTTCCCCACGATACCAC

NM_001140169

IL-13RA-R

ATTCCACCTCCTCCTCAACC

LIFRA-F

TTTAACCTATCCTGGTCCGC

HM190263

LIFRA-R

TACCTTCACCCACTCCACTC

GHR1-F

CGCACCAACACAGATAATGAG

NM_001123576

GHR1-R

GCAAAGACAAGCAGGACAG

IRF9-F

ACAAAGTTTACTGCCTTGTACC

NM_001173719

IRF9-R

ACAACCTCCTCCTCCTTCAC

Myc-2-F

TCCGCTTCCTACCACAAAC

NM_001173816

Myc-2-R

TCCTCCTCATCCTCCACATC

AKT2-F

TTACACTGACACCCTACTGAC

NM_001139690

AKT2-R

AGCCATCCTTCCCTGACTAC

Bcl-X-F

TTGAACCTTGCATCCCACC

NM_001141086

Bcl-X-R

AGTCCTAGATACCTCCCTCC