Table 2 Summary of the results of the enrichment analysis using XPCLR scores as the baseline
Population pair (Objective-Reference) | GSEA: Daub et al. [19] (# of gene sets) | GSEA: GOWINDA (# of gene sets) | Total # of pathways for each population, and the in common pathways between the two GSEA approaches |
|---|---|---|---|
CEU-YRI | 3 | 0 | 3 |
YRI- CEU | 0 | 2 | 2 |
YRI- CHB + JTP | 1 | 7 | 8 of which 1 in common (Cell surface interactions at the vascular wall) |
CHB + JTP-YRI | 1 | 1 | 2 |
CEU- CHB + JTP | 0 | 1 | 1 |
CHB + JTP-CEU | 1 | 1 | 2 |
Total # of pathways for each GSEA | 6 | 12 | 18 of which 1 in common (Cell surface interactions at the vascular wall) |