Exploiting genotyping by sequencing to characterize the genomic structure of the American cranberry through high-density linkage mapping

Table 1 Features of the cranberry integrated (I) and parental bin linkage maps (P₁ and P₂)

LG	Length (cM)			Tot.No.Markers			No.SSR			No.SNP			#Bins		Avg.Gap (cM)
LG	I	P₁	P₂	I	P₁	P₂	I	P₁	P₂	I	P₁	P₂	P₁	P₂	P₁	P₂
1	107.1	138.2	123.0	542	198	220	14	7	10	528	191	210	73	77	1.9	1.6
2	95.8	113.8	95.2	413	192	134	16	10	7	397	182	127	60	49	1.9	1.9
3	100.2	120.8	90.6	357	142	154	15	7	14	342	135	140	50	56	2.4	1.6
4	88.5	115.6	91.2	354	138	172	22	16	12	332	122	160	55	61	2.1	1.5
5	103.8	74.0	96.1	301	29	244	16	4	15	285	25	229	13	69	5.7	1.4
6	97.9	131.8	91.4	421	142	157	12	10	6	409	132	151	53	59	2.5	1.5
7	95.2	116.0	88.6	335	136	110	18	11	10	317	125	100	54	40	2.1	2.2
8	96.7	98.0	78.0	302	104	111	19	13	8	283	91	103	33	46	3.0	1.7
9	78.3	112.8	99.1	473	180	167	19	13	4	454	167	163	48	57	2.3	1.7
10	78.7	85.3	81.4	372	122	152	12	8	4	360	114	148	47	38	1.8	2.1
11	86.0	95.5	103.1	526	162	229	18	9	9	508	153	220	54	66	1.8	1.6
12	83.9	119.3	99.0	453	183	171	20	15	15	433	168	156	52	53	2.3	1.9
Total^a	1112.1	1321.1	1136.7	4849	1728	2021	201	123	114	4648	1605	1907	592	671	2.5	1.7

Summary of total linkage group lengths, total number of markers, number of SSRs, SNPs, number of bins, and average gap in cM
^aSummed across LGs = Length (cM), Tot.No.Markers, No.SSR, No.SNP, #Bins,; Averaged across LGs = Avg.Gap (cM)

ISSN: 1471-2164