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Table 3 The list of two-class DEGs among the first 13 libraries

From: RNA sequencing analysis to capture the transcriptome landscape during skin ulceration syndrome progression in sea cucumber Apostichopus japonicus

Different tissues

Different SUS stages

SUS tissues vs normal tissues

Libraries name

No.of DEGs

Libraries name

No.of DEGs

Libraries name

No.of DEGs

Libraries name

No.of DEGs

H-Int (D2)

vs

H-BW(D1)

↑12,639

↓ 4,297

T 16,936

I-SUS-BW (D5)

vs

H-BW(D1)

↑7,401

↓2,453

T 9,854

II-SUS-BW(D7)

vs

I-SUS-BW (D5)

↑340

↓279

T 619

I-SUS-BW (D5)

vs

I-N-BW (D6)

↑442

↓204

T 646

H-RT(D3)

vs

H-BW(D1)

↑ 13,923

↓ 3,241

T 17,164

II-SUS-BW(D7)

vs

H-BW(D1)

↑7,705

↓2,477

T 10,182

III-SUS-BW(D12)

Vs

II-SUS-BW(D7)

↑299

↓215

T 514

II-SUS-BW (D7)

vs

II-N-BW (D8)

↑ 20

↓107

T 127

H-C(D4)

vs

H-BW(D1)

↑ 12,294

↓ 4,398

T 16,692

III-SUS-BW(D12)

vs

H-BW(D1)

↑7,229

↓2,497

T 9,726

III-SUS-BW(D12)

vs

I-SUS-BW (D5)

↑493

↓453

T 946

III-SUS-BW(D12)

vs

III-N-BW (D13)

↑307

↓261

T 568

II-SUS-Int(D9)

vs

II-SUS-BW(D7)

↑3,758

↓4,889

T 8,647

I-N-BW(D6)

vs

H-BW(D1)

↑7,805

↓1,802

T 9,607

II-N-BW(D8)

vs

I-N-BW(D6)

↑437

↓295

T 732

II-SUS-Int (D9)

vs

H-Int (D2)

↑ 581

↓1,137

T 1,718

II-SUS-RT(D10)

vs

II-SUS-BW(D7)

↑3,523

↓3,365

T 6,888

II-N-BW(D8)

vs

H-BW(D1)

↑7,662

↓2,008

T 9,670

III-N-BW(D13)

vs

II-N-BW(D8)

↑205

↓294

T 499

II-SUS-RT (D10)

vs

H-RT (D3)

↑ 871

↓2,408

T 3,279

II-SUS-C(D11)

vs

II-SUS-BW(D7)

↑1,711

↓4,361

T 6,072

III-N-BW(D13)

vs

H-BW(D1)

↑7,789

↓1,781

T 9,570

III-N-BW(D13)

vs

I-N-BW(D6)

↑531

↓430

T 961

II-SUS-C (D11)

vs

H-C (D4)

↑ 700

↓1,147

T 1,847