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Fig. 6 | BMC Genomics

Fig. 6

From: Genomic and expression analyses of Tursiops truncatus T cell receptor gamma (TRG) and alpha/delta (TRA/TRD) loci reveal a similar basic public γδ repertoire in dolphin and human

Fig. 6

Computationally inferred interaction between RTV1M1 V-gamma domain (TRGV1 – J2) and 5R1D8 V-delta domain (TRDV1-1 N – J4) (a) and between 5RV1M1 V-gamma domain (TRGV1 – J3) and 5R1D15 V-delta domain (TRDV2 – J4) (b) cDNA clonotypes. In RTV1M1 and 5RV1M1 V-gamma domain CDR-IMGT are blue-green-green; in 5R1D8 and 5R1D15 V-delta domain CDR-IMGT are red-orange-purple. IMGT Collier de Perles of RTV1M1/5R1D8 and 5RV1M1/5R1D15 clones are shown [25, 65]. The protein complex interface were computed by the online tool PDBePISA at the EBI server. (http://www.ebi.ac.uk/msd-srv/prot_int/) and visualized by UCSF Chimera tool (http://www.cgl.ucsf.edu/chimera/) (Additional file 14)

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