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Table 5 Predictable changes in biological functioning based on DEG analysis in low-RFI individuals

From: Combination analysis of genome-wide association and transcriptome sequencing of residual feed intake in quality chickens

Categories

Functions annotation

P-value

Predicted

Molecules

Cell Death and Survival

apoptosis of lung cancer cell lines

5.80E-06

↓

CAMP, EREG, G0S2, HSPA5, MCL1, RASD1, SERPINF1, TNFSF10

apoptosis of tumor cell lines

2.08E-05

↓

AR, BCL2A1, CAMP, CAV1, COL18A1, CREM, CTSD, EREG, G0S2, HSPA5, IL18, MAOA, MCL1, NFKBIA, NR0B2, PLAU, RASD1, SERPINF1, TNFSF10, UCHL1

cell death of lung cancer cell lines

3.21E-06

↓

CAMP, EREG, G0S2, HSPA5, MCL1, NFKBIA, RASD1, SERPINF1, TNFSF10

cell death of tumor cell lines

2.75E-05

↓

AR, BCL2A1, BTG1, CAMP, CAV1, COL18A1, CREM, CTSD, EREG, FETUB, G0S2, HSPA5, IL18, MAOA, MCL1, NFKBIA, NR0B2, PLAU, PPAT, RASD1, SERP

cellular degradation

3.77E-04

↓

AR, CACNA1D, CAV1, CREM, CTSD, LYZ, UCHL1

Cellular Assembly and Organization

formation of filaments

1.36E-03

↑

AR, CAV1, COL18A1, HSPA5, PTGDS, SERPINF1, TTR, TUBB

Organismal Development

development of body axis

1.99E-04

↑

ANGPTL3, CCKAR, COL18A1, CREM, CTSD, DIO3, GPR34, HHEX, HSP90B1, INSIG1, LUM, MAOA, NFKBIA, PLAU, SERPINF1

Immune Cell Trafficking

activation of antigen presenting cells

3.47E-04

↓

CAMP, GJB1, HNF4A, HSP90B1, IL18, LECT2, SERPINF1, TNFSF10

Renal and Urological System Development

cell viability of kidney cell lines

3.05E-04

↓

CAV1, HSP90B1, HYOU1, NFKBIA

Cardiovascular Disease

vascular lesion

2.94E-07

↑

ACAT2, CACNA1D, COL18A1, IL18, LPL, MGP, mir-221, NFKBIA, PLAU, TNFSF10