Table 1 Characteristics and sequence accession numbers for dairy-associated B. cereus group isolates sequenced in this study
Isolate | Source | BioSample ID | SRA Run | GenBank accession number | PubMLST ID | rpoB allelic type (AT) | MLST STa | Novel MLST AT or STb |
|---|---|---|---|---|---|---|---|---|
FSL H7-0926 | Pasteurized 2Â % milk | SAMN03800014 | SRR2541537 | LOBD00000000 | 1774 | 90 | 667 | Â |
FSL H8-0482 | Soil from areas adjacent to barns | SAMN03800015 | SRR2541601 | LOAZ00000000 | 1764 | 129 | 223 | Â |
FSL H8-0488 | Water from hose in milking area | SAMN03800016 | SRR2541602 | LOBA00000000 | 1765 | 129 | 111 | Â |
FSL K6-0040 | Raw milk | SAMN03800017 | SRR2541603 | LOBE00000000 | 1775 | 362 | 1101 | ilv 245, ST-1101 |
FSL K6-0043 | Raw milk | SAMN03800018 | SRR2541604 | LOMW00000000 | 1763 | 363 | 1087 | pta 235, ST-1087 |
FSL K6-0067 | Raw milk | SAMN03800019 | SRR2541605 | LOMN00000000 | 1762 | 365 | 1086 | gmk 138, pur 218, ST-1086 |
FSL K6-0069 | Raw milk | SAMN03800020 | SRR2541606 | LOBB00000000 | 1756 | 194 | 1080 | glp 224, gmk 135, ilv 237, pta 233, ST-1080 |
FSL K6-0073 | Raw milk | SAMN03800021 | SRR2541607 | LOMO00000000 | 1773 | 366 | 33 | Â |
FSL K6-0267 | Raw milk | SAMN03800022 | SRR2541613 | LOMP00000000 | 1755 | 90 | 1090 | ST-1090 |
FSL M8-0117 | Raw milk | SAMN03800023 | SRR2541639 | LONG00000000 | 1761 | 308 | 1085 | gmk 137, pyc 186, ST-1085 |
FSL W8-0003 | Ricotta/mozzarella whey | SAMN03800024 | SRR2541640 | LOMQ00000000 | 1760 | 125 | 1084 | ilv 239, ST-1084 |
FSL W8-0050 | Condensed product from evaporator | SAMN03800025 | SRR2541641 | LOMR00000000 | 1772 | 380 | 32 | Â |
FSL W8-0169 | Raw milk | SAMN03800026 | SRR2541651 | LOBC00000000 | 1757 | 61 | 1081 | gmk 136, pta 234, ST-1081 |
FSL W8-0268 | Evaporator - liquid | SAMN03800027 | SRR2541662 | LOMS00000000 | 1759 | 92 | 1083 | tpi 185, ST-1083 |
FSL W8-0275 | Liquid milk whey permeate | SAMN03800028 | SRR2541668 | LOMT00000000 | 1771 | 463 | 1050 | Â |
FSL W8-0483 | Liquid raw milk from silo | SAMN03800029 | SRR2541674 | LOMU00000000 | 1758 | 120 | 1082 | ilv 238, ST-1082 |
FSL W8-0520 | Processed liquid milk | SAMN03800030 | SRR2541680 | LONH00000000 | 1770 | 481 | 1032 | Â |
FSL W8-0523 | Liquid from blended whey silo | SAMN03800031 | SRR2541686 | LOMV00000000 | 1769 | 481 | 1032 | Â |
FSL W8-0640 | Processed skim milk | SAMN03800032 | SRR2541688 | LOQA00000000 | 1754 | 154 | 1089 | ST-1089 |
FSL W8-0824 | Finished dairy product | SAMN03800033 | SRR2541693 | LOQB00000000 | 1767 | 92 | 24 | Â |
FSL W8-0932 | Processed skim milk | SAMN03800034 | SRR2541715 | LOQC00000000 | 1766 | 120 | 365 | Â |
FSL W8-0767 | Milk powder | SAMN03800035 | SRR2541718 | LOQD00000000 | 1768 | 154 | 787 | Â |