Table 1 Distribution of transporters in eleven Streptomyces genomes
From: Genomic data mining reveals a rich repertoire of transport proteins in Streptomyces
Organisms | Accession ID | Genome size (Mbp) | # ORFs | # Transporters | % Transporters |
|---|---|---|---|---|---|
S. avermitilis | NC_003155 (chr) | 9.1 | 7676 | 989 | 12.9Â % |
NC_004719 (pSAP1) | |||||
S. bingchenggensis | NC_016582 (chr) | 11.9 | 10022 | 1258 | 12.6Â % |
S. cattleya | NC_016111(chr) | 8.1 | 7475 | 761 | 10.2Â % |
NC_016113(pSCAT) | |||||
S. coelicolor | NC_003888(chr) | 9.1 | 8153 | 990 | 12.1Â % |
NC_003903 (pSCP1) | |||||
NC_003904 (pSCP2) | |||||
S. flavogriseus | NC_016114 (chr) | 7.7 | 6572 | 888 | 13.5Â % |
NC_016110 (pSFLA01) | |||||
NC_016115 (pSFLA02) | |||||
S. griseus | NC_010572 (chr) | 8.5 | 7136 | 975 | 13.7Â % |
S. hygroscopicus | NC_017765 (chr) | 10.4 | 9108 | 999 | 11.0Â % |
NC_017766 (pSHJG1) | |||||
NC_016972 (pSHJG2) | |||||
S. scabiei | NC_013929 (chr) | 10.1 | 8746 | 1021 | 11.7Â % |
S. sp. SirexAA-E | NC_015953 (chr) | 7.4 | 6357 | 869 | 13.7Â % |
S. venezuelae | NC_018750 (chr) | 8.2 | 7453 | 935 | 12.5Â % |
S. violaceusniger | NC_015957 (chr) | 11.0 | 8985 | 989 | 11.0Â % |
NC_015951(pSTRVI01) | |||||
NC_015952(pSTRVI02) |