Table 9 Breast cancer subtype classification of QNRF
From: CrossLink: a novel method for cross-condition classification of cancer subtypes
QNRF sample | ER | PR | PAM50 R call | PAM50 CL cCall | Cancer 2000 CL call |
|---|---|---|---|---|---|
B10 | + | + | LumB | Basal | cancer2000 icluster 1 |
B13 | + | + | LumA | Basal | cancer2000 icluster 1 |
B14 | NA | NA | LumB | Basal | cancer2000 icluster 3 |
B17 | + | + | Normal | HER2 | cancer2000 icluster 3 |
B18 | + + | + | Normal | HER2 | cancer2000 icluster 3 |
B19 | NA | NA | LumB | HER2 | cancer2000 icluster 3 |
B20 | + | + | Basal | HER2 | cancer2000 icluster 3 |
B21 | + | + | Lum B | Lum B | cancer2000 icluster 3 |
B22 | - | - | LumB | Basal | cancer2000 icluster 3 |
B23 | + | + | LumB | Basal | cancer2000 icluster 3 |
B24 | + | + | LumB | Basal | cancer2000 icluster 3 |
B25 | - | - | LumB | Basal | cancer2000 icluster 3 |
B26 | + | + | Basal | Basal | cancer2000 icluster 3 |
B27 | + | + | Basal | Basal | cancer2000 icluster 3 |
B2 | - | - | Lum B | Basal | cancer2000 icluster 1 |
B3 | NA | NA | Lum B | Basal | cancer2000 icluster 1 |
B4 | + | + | Lum B | HER2 | cancer2000 icluster 5 |
B5 | + | - | Lum B | Basal | cancer2000 icluster 1 |
B6 | - | - | Basal | Basal | cancer2000 icluster 1 |
B7 | NA | NA | Lum A | Basal | cancer2000 icluster 1 |