Table 2 Overall performance comparison for Ion Proton testing benchmark
From: Statistical modeling for sensitive detection of low-frequency single nucleotide variants
Poisson | NB | ZIP | ZINB | VarScan2 | |
|---|---|---|---|---|---|
Recall | 0.98 | 0.89 | 0.95 | 0.90 | 0.83 |
Precision | 0.25 | 0.62 | 0.54 | 0.71 | 0.53 |
F1 Score | 0.40 | 0.73 | 0.69 | 0.79 | 0.65 |