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Table 1 Four molecular profiles datasets for tumor and cell lines comparison in breast cancer

From: Comprehensive comparison of molecular portraits between cell lines and tumors in breast cancer

Data types Sources Platforms Samples size
Copy number variation TCGA;CCLE Affymatrix SNP 6.0 1033; 59
Mutation (Exome Sequencing) TCGA;CCLE Illumina GAIIx 967; 51
Gene expression TCGA; GEO; CCLE AgilentG4502A_07_3 (TCGA); Affymatrix HU133 Plus 2.0 (GEO; CCLE) 530; 279; 58
Protein TCGA; CCLE RPPA 197; 38